Co-expression analysis

Gene ID Zm.13558.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g26340: CB5-A (CYTOCHROME B5 ISOFORM A) (HF=1e-3)
Module size 13 genes
NF 0.36
%ile 37.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8194.30.85Zm.13558.1.A1_atBQ163517--1e-3At1g26340CB5-A (CYTOCHROME B5 ISOFORM A)O.I.H.G.S.X.
0.6986.50.90Zm.3892.5.A1_atBM07963460S ribosomal protein L28-6e-7At2g1973060S ribosomal protein L28 (RPL28A)O.I.H.G.S.X.
0.5369.10.92Zm.14068.1.S1_atAI920492vacuolar protein-sorting protein 45-2e-23At1g77140VPS45 (VACUOLAR PROTEIN SORTING 45)O.I.H.G.S.X.
0.4251.30.94Zm.10798.1.A1_atCF003582Hypothetical protein LOC100191405-1e-2At1g26930kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.4251.30.92Zm.1829.1.S1_atAY103809.1--3e+0At5g17710EMB1241 (embryo defective 1241)O.I.H.G.S.X.
0.4149.70.83Zm.16065.2.A1_s_atBM080549Histone H2B.3-8e-15At1g07790HTB1O.I.H.G.S.X.
0.3844.20.94ZmAffx.706.1.A1_atAI738209--8e-1At1g23590unknown proteinO.I.H.G.S.X.
0.3641.30.93Zm.1866.1.A1_atAW498013--5e-7At4g11270transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.3538.90.91Zm.18531.1.A1_atBE575145hypothetical protein LOC100192889-2e+0At4g21280oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ)O.I.H.G.S.X.
0.3336.00.92Zm.4541.1.S1_atAY104176.1hypothetical protein LOC100274427-5e-8At5g67400peroxidase 73 (PER73) (P73) (PRXR11)O.I.H.G.S.X.
0.3029.80.93Zm.13434.1.A1_atAW562937hypothetical protein LOC100192499-4e-12At5g56090COX15 (cytochrome c oxidase 15)O.I.H.G.S.X.
0.1912.80.92ZmAffx.1.1.S1_s_atAY722707.1hypothetical LOC542518-5e-51At1g57870ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)O.I.H.G.S.X.
0.169.40.88ZmAffx.262.1.A1_s_atAI670379acidic ribosomal protein P3-3e+0At4g27410RD26 (RESPONSIVE TO DESICCATION 26)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.298.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.798.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.298.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.598.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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