Co-expression analysis

Gene ID Zm.13537.1.S1_at
Gene name hypothetical protein LOC100216867
Homology with ArabidopsisSimilar to At1g23210: AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6) (HF=1e-9)
Module size 16 genes
NF 0.15
%ile 10.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.90.97Zm.13537.1.S1_atAY108307.1hypothetical protein LOC100216867-1e-9At1g23210AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6)O.I.H.G.S.X.
0.3538.90.99Zm.2313.1.S1_atCF625540--4e-1At1g31160zinc-binding protein, putative / protein kinase C inhibitor, putativeO.I.H.G.S.X.
0.2724.60.99ZmAffx.1221.1.S1_at11990232-113--1e+0At1g07140SIRANBPO.I.H.G.S.X.
0.2622.70.99Zm.9157.1.A1_atCB351321molybdenum cofactor synthesis protein 2 large subunit-7e+0At1g50760unknown proteinO.I.H.G.S.X.
0.2521.30.99Zm.3902.1.S1_atAY106289.1--1e+0At5g55570unknown proteinO.I.H.G.S.X.
0.2521.30.99ZmAffx.896.1.A1_atAI770881--3e+0At5g57620MYB36 (myb domain protein 36)O.I.H.G.S.X.
0.2115.50.99Zm.8181.1.A1_atBE643624hypothetical protein LOC100193608-2e-1At1g043502-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.
0.1811.60.99Zm.17475.1.S1_x_atCK368991Glutathione transferase13-4e+0At4g17940bindingO.I.H.G.S.X.
0.1811.60.99Zm.6743.2.S1_atAY104873.1permease I-2e-23At5g62890permease, putativeO.I.H.G.S.X.
0.1710.60.99ZmAffx.57.1.A1_atAI665066cupin family protein-1e+1At3g43083LCR33 (Low-molecular-weight cysteine-rich 33)O.I.H.G.S.X.
0.158.60.98Zm.2313.1.A1_atAW438144zinc-binding protein-4e-1At1g31160zinc-binding protein, putative / protein kinase C inhibitor, putativeO.I.H.G.S.X.
0.136.80.98Zm.13993.1.A1_atCA998675--8e-6At3g13380BRL3 (BRI1-LIKE 3)O.I.H.G.S.X.
0.136.80.99Zm.10549.1.A1_atBQ538239hypothetical protein LOC100277053-1e+0At5g35890beta-galactosidaseO.I.H.G.S.X.
0.125.90.99Zm.14947.1.A1_atCK787043--6e+0At2g42500PP2A-4O.I.H.G.S.X.
0.094.00.99ZmAffx.903.1.A1_atAI770912--1e+1At3g42310unknown proteinO.I.H.G.S.X.
0.041.50.99Zm.5969.2.A1_a_atAI629909hypothetical protein LOC100272999 /// hypothetical protein LOC100273990-2e+0At5g59030COPT1 (copper transporter 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.998.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM202295Mo17xB73 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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