Co-expression analysis

Gene ID Zm.13525.1.A1_at
Gene name 12-oxo-phytodienoic acid reductase
Homology with ArabidopsisSimilar to At5g02220: unknown protein (HF=2e+1)
Module size 9 genes
NF 0.52
%ile 66.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5674.40.97Zm.13525.1.A1_atCB27825212-oxo-phytodienoic acid reductase-2e+1At5g02220unknown proteinO.I.H.G.S.X.
0.6785.80.97Zm.4204.1.S1_a_atAY103547.1--2e-26At2g24200cytosol aminopeptidaseO.I.H.G.S.X.
0.5775.10.97Zm.16907.1.S1_atAI691771--4e-50At3g18000XPL1 (XIPOTL 1)O.I.H.G.S.X.
0.5267.30.97Zm.19155.2.A1_x_atCO526374--7e-9At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)O.I.H.G.S.X.
0.5065.70.97ZmAffx.758.1.A1_atAI746000hypothetical protein LOC100273671-3e-3At4g22260IM (IMMUTANS)O.I.H.G.S.X.
0.4658.40.97Zm.2903.1.A1_atCF019919hypothetical protein LOC100274564-9e-8At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)O.I.H.G.S.X.
0.4658.40.97Zm.2072.1.S1_atBG842253--7e-1At5g14260SET domain-containing proteinO.I.H.G.S.X.
0.4149.70.97Zm.4132.1.A1_atCO529833hypothetical protein LOC100276765-4e-14At1g16520unknown proteinO.I.H.G.S.X.
0.3641.30.97Zm.7069.1.S1_atAF036891.2plastid starch synthase I precursor-3e-4At5g24300SSI1 (SUPPRESSOR OF SALICYLIC ACID INSENSITIVITY 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.698.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.298.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.898.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.391.7GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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