Co-expression analysis

Gene ID Zm.13494.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g17300: unknown protein (HF=4e-1)
Module size 8 genes
NF 0.45
%ile 55.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6077.80.96Zm.13494.1.S1_atAY108782.1--4e-1At2g17300unknown proteinO.I.H.G.S.X.
0.5065.70.97Zm.531.2.A1_atCK347531RNA polymerase II transcriptional coactivator KIWI-3e-1At3g55520immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putativeO.I.H.G.S.X.
0.4658.40.98Zm.12940.2.S1_atAI770813--8e-1At4g15050unknown proteinO.I.H.G.S.X.
0.4352.80.97Zm.442.1.S1_atAF104924.2unconventional myosin heavy chain-5e-48At5g20490XIKO.I.H.G.S.X.
0.3844.20.97Zm.6451.2.S1_a_atAI770434--2e-4At1g59750ARF1 (AUXIN RESPONSE FACTOR 1)O.I.H.G.S.X.
0.3641.30.98Zm.5435.1.A1_atCO519825mTERF-like protein-1e+0At3g60870DNA-binding protein-relatedO.I.H.G.S.X.
0.3336.00.98ZmAffx.827.1.A1_atAI770520Growth-regulating factor 8-like-3e+0At3g21610-O.I.H.G.S.X.
0.3131.60.97Zm.1042.1.A1_atAY105661.1--3e-1At2g25340ATVAMP712 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 712)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.399.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.899.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.799.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.398.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.298.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.198.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.598.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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