Co-expression analysis

Gene ID	Zm.13443.1.A1_at
Gene name	Histone H2A
Homology with Arabidopsis	Similar to At5g02560: HTA12 (HF=4e-11)
Module size	6 genes
NF	0.03
%ile	1.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.92	Zm.13443.1.A1_at	U08225.1	Histone H2A	-	4e-11	At5g02560	HTA12	O.I.	H.G.	S.X.	Please select
0.07	2.9	0.93	Zm.3165.1.A1_at	CF633794	terpene synthase 7	-	2e+0	At3g61840	unknown protein	O.I.	H.G.	S.X.	Please select
0.02	0.7	0.93	Zm.3200.2.A1_at	BG842715	hypothetical protein LOC100279839	-	8e-5	At1g74320	choline kinase, putative	O.I.	H.G.	S.X.	Please select
0.02	0.7	0.92	Zm.960.1.S1_at	BU093044	hypothetical protein LOC100274333	-	1e-4	At2g22830	SQE2 (squalene epoxidase 2)	O.I.	H.G.	S.X.	Please select
0.02	0.7	0.92	Zm.6522.1.A1_x_at	AI745745	Hypothetical protein LOC100216568	-	3e-15	At4g03410	peroxisomal membrane protein-related	O.I.	H.G.	S.X.	Please select
0.01	0.3	0.92	ZmAffx.1035.1.S1_at	AI881720	-	-	3e+0	At4g38400	ATEXLA2 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.1	96.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.3	96.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.5	95.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.2	94.5	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.0	94.0	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.0	94.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.9	93.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.9	93.8	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.8	93.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.6	92.9	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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