| Gene ID | Zm.13431.1.A1_at |
| Gene name | hypothetical LOC542282 |
| Homology with Arabidopsis | Similar to At3g54940: - (HF=2e+0) |
| Module size | 6 genes |
| NF | 0.27 |
| %ile | 23.8 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 99.0 | 0.98 | Zm.13431.1.A1_at | AY110841.1 | hypothetical LOC542282 | - | 2e+0 | At3g54940 | - | O.I. | H.G. | S.X. | |
| 0.35 | 38.9 | 1.00 | Zm.12402.1.S1_at | AY109060.1 | hypothetical protein LOC100193926 | - | 3e-7 | At4g33000 | CBL10 (CALCINEURIN B-LIKE 10) | O.I. | H.G. | S.X. | |
| 0.29 | 28.1 | 0.99 | ZmAffx.1208.1.A1_at | BE186278 | - | - | 8e-1 | At1g20580 | small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative | O.I. | H.G. | S.X. | |
| 0.22 | 16.9 | 1.00 | Zm.10332.1.A1_at | BQ048110 | - | - | 2e+0 | At3g28990 | unknown protein | O.I. | H.G. | S.X. | |
| 0.20 | 14.2 | 0.99 | Zm.13513.1.S1_at | CO528571 | hypothetical protein LOC100193945 | - | 2e-3 | At2g18030 | peptide methionine sulfoxide reductase family protein | O.I. | H.G. | S.X. | |
| 0.09 | 4.0 | 1.00 | ZmAffx.104.1.A1_at | AI665536 | hypothetical protein LOC100273079 | - | 8e-1 | At2g34980 | SETH1 | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 16.1 | 99.0 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 16.0 | 99.0 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 15.8 | 99.0 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 15.8 | 99.0 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 15.7 | 99.0 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 14.8 | 98.9 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 13.7 | 98.8 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 13.3 | 98.8 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.6 | 98.6 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.7 | 95.4 | GSM320457 | protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.63 | 82.7 | Os09g0562700 | At3g54940 | - | Pre-pro-TPE4A protein precursor | 1e-1 | At3g54940 | - | O.I. | H.G. | S.X. | |
| 0.35 | 41.7 | Os02g0629200 | At3g54940 | - | Plasma membrane integral protein ZmPIP2-3 | 1e+0 | At2g37180 | RD28 (RESPONSIVE TO DESICCATION 28) | O.I. | H.G. | S.X. | |
| 0.33 | 38.8 | Os01g0214800 | At3g54940 | - | Lipolytic enzyme, G-D-S-L family protein | 5e-2 | At1g28590 | lipase, putative | O.I. | H.G. | S.X. | |
| 0.27 | 27.5 | Os05g0105000 | At3g54940 | - | Methionine S-methyltransferase (EC 2.1.1.12)(AdoMet:Met S- methyltransferase) (Hv-MMT1) | 1e-29 | At5g49810 | MMT | O.I. | H.G. | S.X. | |
| 0.25 | 24.1 | Os10g0479700 | At3g54940 | - | Conserved hypothetical protein | 6e-8 | At2g28315 | - | O.I. | H.G. | S.X. | |
| 0.24 | 22.4 | Os12g0502800 | At3g54940 | - | Allantoin permease | 2e-20 | At2g03590 | ATUPS1 (ARABIDOPSIS THALIANA UREIDE PERMEASE 1) | O.I. | H.G. | S.X. | |
| 0.21 | 17.9 | Os02g0273700 | At3g54940 | - | VHS domain containing protein | 2e-8 | At4g32760 | protein transporter | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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