Co-expression analysis

Gene ID Zm.13426.1.S1_at
Gene name hypothetical protein LOC100194289
Homology with ArabidopsisSimilar to At4g18100: 60S ribosomal protein L32 (RPL32A) (HF=7e-9)
Module size 23 genes
NF 0.41
%ile 46.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9699.80.90Zm.13426.1.S1_atCK826831hypothetical protein LOC100194289-7e-9At4g1810060S ribosomal protein L32 (RPL32A)O.I.H.G.S.X.
0.5875.10.94Zm.8561.2.A1_a_atBM332166hypothetical protein LOC100277438-4e+0At4g05070unknown proteinO.I.H.G.S.X.
0.5674.40.94Zm.9159.1.A1_atBM340817--4e-1At5g13850NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)O.I.H.G.S.X.
0.5469.80.92Zm.3689.1.A1_atAW042272--5e-2At5g28770BZO2H3O.I.H.G.S.X.
0.4961.90.94Zm.5655.1.A1_atCO532954hypothetical protein LOC100272896-1e-8At2g14910unknown proteinO.I.H.G.S.X.
0.4861.30.95Zm.5277.1.S1_atAI619073--1e+0At4g39750F-box family protein-relatedO.I.H.G.S.X.
0.4556.40.96Zm.56.1.S1_atU12233.1GTP binding protein2-4e-9At4g34460AGB1 (GTP BINDING PROTEIN BETA 1)O.I.H.G.S.X.
0.4455.70.95Zm.3756.1.A1_atBE025409--8e-3At2g24520AHA5 (Arabidopsis H(+)-ATPase 5)O.I.H.G.S.X.
0.4149.70.94Zm.9958.2.A1_atCA399148--2e+0At5g17480APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1)O.I.H.G.S.X.
0.4048.50.95Zm.6443.1.A1_atCA404297hypothetical protein AY107910-4e-25At2g02560CAND1 (CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED)O.I.H.G.S.X.
0.3742.30.94Zm.6698.1.S1_atAY104868.1--5e+0At5g13890unknown proteinO.I.H.G.S.X.
0.3641.30.93Zm.13942.1.A1_atCF637457hypothetical protein LOC100279675-2e-6At4g00585unknown proteinO.I.H.G.S.X.
0.3641.30.96Zm.3756.1.S1_atAY110095.1--1e-1At4g13850GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)O.I.H.G.S.X.
0.3641.30.95Zm.2376.4.A1_x_atCK368489cortical cell-delineating protein-6e+0At3g24510-O.I.H.G.S.X.
0.3538.90.95Zm.5290.1.S1_atAY104548.1F-box domain containing protein-4e+0At3g07260forkhead-associated domain-containing protein / FHA domain-containing proteinO.I.H.G.S.X.
0.3437.20.92Zm.7309.1.S1_s_atAF384036.1nucleosome/chromatin assembly factor A /// nucleosome/chromatin assembly factor A-2e-3At1g18800NRP2 (NAP1-RELATED PROTEIN 2)O.I.H.G.S.X.
0.3437.20.96Zm.4190.1.A1_atBE344878--9e-31At4g34350HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE)O.I.H.G.S.X.
0.3233.40.97Zm.3772.1.S1_atCF010220Zea m 1 allergen-6e-4At2g40470LBD15 (LOB DOMAIN-CONTAINING PROTEIN 15)O.I.H.G.S.X.
0.3029.80.92Zm.3103.2.S1_atAI666115Hypothetical protein LOC100194107-2e+0At1g60650glycine-rich RNA-binding protein, putativeO.I.H.G.S.X.
0.2622.70.96Zm.14337.1.S1_atAY107073.1hypothetical protein LOC100191876-2e+0At5g12990CLE40 (CLAVATA3/ESR-RELATED 40)O.I.H.G.S.X.
0.2419.80.96Zm.4810.1.A1_atAI745785--5e+0At3g60390HAT3 (HOMEOBOX-LEUCINE ZIPPER PROTEIN 3)O.I.H.G.S.X.
0.2318.60.96Zm.481.1.S1_atAF227632.1mismatch binding protein Mus3-2e-8At4g02070MSH6 (MUTS HOMOLOG 6)O.I.H.G.S.X.
0.147.70.94Zm.5020.1.S1_atAI600437hypothetical protein LOC100216870-1e-5At4g29080PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.798.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.097.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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