Co-expression analysis

Gene ID Zm.134.1.S1_at
Gene name Zea AGAMOUS homolog2
Homology with ArabidopsisSimilar to At2g42830: SHP2 (SHATTERPROOF 2) (HF=5e-11)
Module size 6 genes
NF 0.92
%ile 99.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.99Zm.134.1.S1_atU31521.1Zea AGAMOUS homolog2-5e-11At2g42830SHP2 (SHATTERPROOF 2)O.I.H.G.S.X.
0.9199.00.99Zm.13400.1.A1_atAF457956.1--6e-1At4g32850nPAP (NUCLEAR POLY(A) POLYMERASE)O.I.H.G.S.X.
0.9199.00.99Zm.2565.1.A1_atAY112147.1--2e+0At4g28050TET7 (TETRASPANIN7)O.I.H.G.S.X.
0.8395.60.99Zm.2568.1.A1_a_atBM079095hypothetical protein LOC100276990-6e+0At3g17070peroxidase, putativeO.I.H.G.S.X.
0.8395.60.99Zm.2569.1.A1_atCF635472agmatine coumaroyltransferase-7e+0At4g27900-O.I.H.G.S.X.
0.7188.20.99Zm.13400.1.S1_atAF457956.1--6e-1At4g32850nPAP (NUCLEAR POLY(A) POLYMERASE)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.398.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.194.3GSM202290Mo17 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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