Co-expression analysis

Gene ID Zm.13317.1.S1_at
Gene name hypothetical protein LOC100277679
Homology with ArabidopsisSimilar to At3g55790: unknown protein (HF=2e-1)
Module size 7 genes
NF 0.32
%ile 31.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6785.80.96Zm.13317.1.S1_atCA827898hypothetical protein LOC100277679-2e-1At3g55790unknown proteinO.I.H.G.S.X.
0.5571.60.96Zm.5987.1.A2_a_atAF019147.1cysteine protease 1 /// cysteine protease 1 /// cysteine proteinase Mir3-7e-14At5g43060cysteine proteinase, putative / thiol protease, putativeO.I.H.G.S.X.
0.4048.50.97Zm.17849.1.S1_atAY110409.1hypothetical protein LOC100192672-1e-71At1g10950endomembrane protein 70, putativeO.I.H.G.S.X.
0.3336.00.96Zm.3558.1.A1_atCA402352--3e+0At1g68620hydrolaseO.I.H.G.S.X.
0.2828.10.96Zm.10265.1.A1_atBM660318hypothetical protein LOC100279289-2e-4At3g02090mitochondrial processing peptidase beta subunit, putativeO.I.H.G.S.X.
0.1811.60.97Zm.12954.1.A1_atAW066601ADP-ribosylation factor-1e-26At2g18390TTN5 (TITAN 5)O.I.H.G.S.X.
0.125.90.97Zm.9425.1.A1_a_atBM268756hypothetical protein LOC100274829-2e+1At5g23440FTRA1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.698.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.094.0GSM320462protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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