Co-expression analysis

Gene ID	Zm.13245.1.S1_at
Gene name	CBF3-like protein
Homology with Arabidopsis	Similar to At3g22800: leucine-rich repeat family protein / extensin family protein (HF=2e+0)
Module size	6 genes
NF	0.25
%ile	20.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.2	0.99	Zm.13245.1.S1_at	AF450481.1	CBF3-like protein	-	2e+0	At3g22800	leucine-rich repeat family protein / extensin family protein	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.99	Zm.6203.2.A1_a_at	CF637772	putative glutathione peroxidase	-	2e-40	At4g11600	ATGPX6 (GLUTATHIONE PEROXIDASE 6)	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.99	Zm.2939.2.A1_a_at	U39958.1	NADP-dependent malic enzyme	-	1e-40	At5g11670	ATNADP-ME2 (NADP-malic enzyme 2)	O.I.	H.G.	S.X.	Please select
0.18	11.6	0.99	Zm.1693.1.A1_at	BM382165	-	-	4e-3	At3g55670	-	O.I.	H.G.	S.X.	Please select
0.18	11.6	0.99	Zm.629.1.S1_at	AF127021.1	RNA polymerase T phage-like 1	-	9e-15	At1g68990	DNA-directed RNA polymerase, mitochondrial (RPOMT)	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.99	ZmAffx.485.1.A1_at	AI691349	-	-	8e-1	Atmg00140	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.2	98.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.9	97.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4	97.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4	97.5	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.2	97.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.8	97.2	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.8	97.2	GSM253269	ZM_4.5d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
5.7	97.2	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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