Co-expression analysis

Gene ID Zm.13232.1.S1_at
Gene name tyrosine/DOPA decarboxylase 2
Homology with ArabidopsisSimilar to At2g04630: NRPB6B (HF=9e-1)
Module size 7 genes
NF 0.58
%ile 77.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6381.10.99Zm.13232.1.S1_atCA452744tyrosine/DOPA decarboxylase 2-9e-1At2g04630NRPB6BO.I.H.G.S.X.
0.7188.20.99Zm.4869.2.S1_atAI603770hypothetical protein LOC100274701-1e-20At3g07050GTP-binding family proteinO.I.H.G.S.X.
0.5775.10.99Zm.7144.1.A1_atCD437816chalcone isomerase 3-2e+0At1g73260trypsin and protease inhibitor family protein / Kunitz family proteinO.I.H.G.S.X.
0.5674.40.99Zm.7091.1.A1_x_atU23190.1chlorophyll a/b-binding apoprotein CP24 precursor-3e-15At1g15820LHCB6 (LIGHT HARVESTING COMPLEX PSII SUBUNIT 6)O.I.H.G.S.X.
0.5674.40.99Zm.7240.1.S1_atBI430972--1e-18At5g614502-phosphoglycerate kinase-relatedO.I.H.G.S.X.
0.4251.30.99Zm.4863.1.S1_atAW600383--2e-1At2g38465unknown proteinO.I.H.G.S.X.
0.3336.00.99Zm.7090.1.S1_atAY105718.1hypothetical protein LOC100191899-6e+0At5g01740-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.797.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.196.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.296.0GSM385710Deep-sowing 10d treatment TIBA, biological rep2GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
4.296.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os01g0770200, orthologous to the query gene, Zm.13232.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6583.8Os01g0770200At2g04630-Tyrosine decarboxylase 1 (EC 4.1.1.25) (ELI5)(Fragment)1e+0At5g18090transcriptional factor B3 family proteinO.I.H.G.S.X.
0.5068.0Os08g0521300At2g04630-Conserved hypothetical protein2e-1At3g20557unknown proteinO.I.H.G.S.X.
0.3948.3Os01g0770100At2g04630-Protein of unknown function DUF1298 domaincontaining protein9e-1At3g49200unknown proteinO.I.H.G.S.X.
0.3846.9Os10g0527100At2g04630-Chloroplast ATP synthase a chain precursor (EC3.6.3.14) (ATPase subunit IV)2e+0At5g15850COL1 (constans-like 1)O.I.H.G.S.X.
0.3541.7Os07g0662800At2g04630-Aromatic amino acid permease family protein1e-6At5g19500tryptophan/tyrosine permease family proteinO.I.H.G.S.X.
0.3440.0Os01g0792400At2g04630-Photosystem I assembly protein ycf42e-53Atcg00520-O.I.H.G.S.X.
0.3338.8Os05g0295200At2g04630-Abortive infection protein family protein1e+0At3g07390AIR12O.I.H.G.S.X.
0.2931.1Os08g0288200At2g04630-Adenylate kinase family protein1e+0At2g26810unknown proteinO.I.H.G.S.X.
0.2931.1Os04g0235600At2g04630-ATP synthase B chain (EC 3.6.3.14) (Subunit I)2e-42Atcg00130-O.I.H.G.S.X.
0.2931.1Os01g0692300At2g04630-Hypothetical protein3e-1At5g45870Bet v I allergen family proteinO.I.H.G.S.X.
0.2727.5Os10g0370700At2g04630-Nitrate transporter (Fragment)5e-2At1g62200proton-dependent oligopeptide transport (POT) family proteinO.I.H.G.S.X.
0.2625.6Os12g0292900At2g04630-ATP-binding region, ATPase-like domain containingprotein5e-6At1g67840CSK (CHLOROPLAST SENSOR KINASE)O.I.H.G.S.X.
0.2625.6Os04g0613300At2g04630-Conserved hypothetical protein2e-10At1g16320unknown proteinO.I.H.G.S.X.
0.1611.3Os05g0243200At2g04630-Ribosomal protein L131e-1At1g49310unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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