Co-expression analysis

Gene ID Zm.13202.1.A1_at
Gene name hypothetical protein LOC100273129
Homology with ArabidopsisSimilar to At1g56590: clathrin adaptor complexes medium subunit family protein (HF=1e-8)
Module size 6 genes
NF 0.70
%ile 91.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.99Zm.13202.1.A1_atCA403491hypothetical protein LOC100273129-1e-8At1g56590clathrin adaptor complexes medium subunit family proteinO.I.H.G.S.X.
0.6785.80.98Zm.737.2.A1_atAI746142--4e-6At5g60360AALP (Arabidopsis aleurain-like protease)O.I.H.G.S.X.
0.6179.50.98Zm.3707.1.A1_atAY107773.1vacuolar cation/proton exchanger 2-1e-4At3g13320CAX2 (CATION EXCHANGER 2)O.I.H.G.S.X.
0.6179.50.98Zm.2602.1.S1_atAY109922.1hypothetical protein LOC100217277-1e-2At5g243403'-5' exonuclease domain-containing proteinO.I.H.G.S.X.
0.5065.70.98Zm.5729.1.A1_atAI637125peptidoglycan binding domain containing protein-3e-23At4g13670PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5)O.I.H.G.S.X.
0.5065.70.99Zm.17172.1.A1_atAI664919--2e+0At1g55675unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.999.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.899.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.499.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.215902.1.S1_at, orthologous to the query gene, Zm.13202.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.99100.0PtpAffx.215902.1.S1_atAt1g56590hypothetical protein-1e-66At1g56590clathrin adaptor complexes medium subunit family proteinO.I.H.G.S.X.
0.3863.7PtpAffx.69398.1.A1_atAt1g56590hypothetical protein-8e-1At5g58280transcriptional factor B3 family proteinO.I.H.G.S.X.
0.3255.2PtpAffx.132513.1.S1_atAt1g56590hypothetical protein-2e-3At2g42070ATNUDX23 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 23)O.I.H.G.S.X.
0.3052.0PtpAffx.204372.1.S1_s_atAt1g56590hypothetical protein-1e-42At4g38240CGL1 (COMPLEX GLYCAN LESS 1)O.I.H.G.S.X.
0.3052.0PtpAffx.2347.1.S1_atAt1g56590hypothetical protein-2e-12At1g24050unknown proteinO.I.H.G.S.X.
0.2950.5PtpAffx.209279.1.S1_atAt1g56590hypothetical protein-1e-25At5g05660ATNFXL2O.I.H.G.S.X.
0.2850.5PtpAffx.125394.1.S1_atAt1g56590--2e-2At1g63310-O.I.H.G.S.X.
0.2645.2PtpAffx.135867.1.A1_atAt1g56590--1e-4At1g53710hydrolase/ protein serine/threonine phosphataseO.I.H.G.S.X.
0.2543.6PtpAffx.132056.1.A1_s_atAt1g56590DNA methyltransferase-8e-3At5g14620DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2)O.I.H.G.S.X.
0.2441.8PtpAffx.39208.1.S1_atAt1g56590hypothetical protein-6e-58At4g24550clathrin adaptor complexes medium subunit family proteinO.I.H.G.S.X.
0.2441.8PtpAffx.1688.1.S1_atAt1g56590hypothetical protein-2e-9At3g26780catalyticO.I.H.G.S.X.
0.2441.8Ptp.908.1.S1_atAt1g56590hypothetical protein-5e+0At5g07100WRKY26O.I.H.G.S.X.
0.2340.5PtpAffx.222230.1.S1_atAt1g56590hypothetical protein-6e-19At1g05270TraB family proteinO.I.H.G.S.X.
0.2238.3PtpAffx.140123.1.S1_s_atAt1g56590hypothetical protein-1e-25At2g36360kelch repeat-containing proteinO.I.H.G.S.X.
0.2136.5PtpAffx.161733.1.S1_atAt1g56590hypothetical protein-2e-30At3g53570AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1)O.I.H.G.S.X.
0.2136.5PtpAffx.216904.1.S1_s_atAt1g56590hypothetical protein-2e-116At5g38880unknown proteinO.I.H.G.S.X.
0.2034.6PtpAffx.209798.1.S1_atAt1g56590hypothetical protein-3e-4At5g45660unknown proteinO.I.H.G.S.X.
0.2034.6PtpAffx.135344.1.S1_atAt1g56590hypothetical protein-1e-7At4g24840-O.I.H.G.S.X.
0.2034.6PtpAffx.201690.1.S1_s_atAt1g56590--8e-109At3g54610GCN5O.I.H.G.S.X.
0.2034.6PtpAffx.202894.1.S1_atAt1g56590hypothetical protein-2e-32At1g17440EER4 (ENHANCED ETHYLENE RESPONSE 4)O.I.H.G.S.X.
0.2034.6Ptp.681.1.A1_s_atAt1g56590--2e-9At4g01320ATSTE24O.I.H.G.S.X.
0.1932.7PtpAffx.7433.2.A1_atAt1g56590hypothetical protein-1e-34At3g04460PEX12O.I.H.G.S.X.
0.1932.7PtpAffx.206199.1.S1_atAt1g56590hypothetical protein-1e-3At5g20700senescence-associated protein-relatedO.I.H.G.S.X.
0.1729.1PtpAffx.204884.1.S1_x_atAt1g56590hypothetical protein-1e-38At1g51450SPla/RYanodine receptor (SPRY) domain-containing proteinO.I.H.G.S.X.
0.1626.9Ptp.7631.1.S1_atAt1g56590--1e-10At1g47570zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1626.9PtpAffx.2700.1.A1_atAt1g56590hypothetical protein-1e-6At5g57860ubiquitin family proteinO.I.H.G.S.X.
0.1321.6Ptp.4028.1.S1_atAt1g56590hypothetical protein-3e-45At5g09680cytochrome b5 domain-containing proteinO.I.H.G.S.X.
0.1321.6PtpAffx.219764.1.S1_atAt1g56590hypothetical protein-3e-6At2g37035unknown proteinO.I.H.G.S.X.
0.1219.6Ptp.7847.1.S1_s_atAt1g56590hypothetical protein-4e-7At3g22680unknown proteinO.I.H.G.S.X.
0.1118.1PtpAffx.202359.1.S1_atAt1g56590hypothetical protein-6e-5At1g10240FRS11 (FAR1-related sequence 11)O.I.H.G.S.X.
0.1118.1PtpAffx.203424.1.S1_atAt1g56590hypothetical protein-1e-32At1g11780oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.1118.1PtpAffx.89262.2.S1_a_atAt1g56590hypothetical protein-1e-13At3g06790plastid developmental protein DAG, putativeO.I.H.G.S.X.
0.0711.6Ptp.4677.1.S1_atAt1g56590hypothetical protein-9e-6At2g42030zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.069.8PtpAffx.62134.1.S1_atAt1g56590hypothetical protein-3e-1At5g14250COP13 (CONSTITUTIVE PHOTOMORPHOGENIC 13)O.I.H.G.S.X.
0.069.8PtpAffx.211109.1.S1_atAt1g56590hypothetical protein-3e-21At1g08700presenilin family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera



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