Co-expression analysis

Gene ID Zm.13202.1.A1_at
Gene name hypothetical protein LOC100273129
Homology with ArabidopsisSimilar to At1g56590: clathrin adaptor complexes medium subunit family protein (HF=1e-8)
Module size 6 genes
NF 0.70
%ile 91.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.99Zm.13202.1.A1_atCA403491hypothetical protein LOC100273129-1e-8At1g56590clathrin adaptor complexes medium subunit family proteinO.I.H.G.S.X.
0.6785.80.98Zm.737.2.A1_atAI746142--4e-6At5g60360AALP (Arabidopsis aleurain-like protease)O.I.H.G.S.X.
0.6179.50.98Zm.3707.1.A1_atAY107773.1vacuolar cation/proton exchanger 2-1e-4At3g13320CAX2 (CATION EXCHANGER 2)O.I.H.G.S.X.
0.6179.50.98Zm.2602.1.S1_atAY109922.1hypothetical protein LOC100217277-1e-2At5g243403'-5' exonuclease domain-containing proteinO.I.H.G.S.X.
0.5065.70.98Zm.5729.1.A1_atAI637125peptidoglycan binding domain containing protein-3e-23At4g13670PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5)O.I.H.G.S.X.
0.5065.70.99Zm.17172.1.A1_atAI664919--2e+0At1g55675unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.999.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.899.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.499.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os05g0383100, orthologous to the query gene, Zm.13202.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5068.0Os05g0383100At1g56590-Clathrin adaptor complex, medium chain familyprotein3e-7At1g56590clathrin adaptor complexes medium subunit family proteinO.I.H.G.S.X.
0.7391.1Os02g0688500At1g56590-ALG6, ALG8 glycosyltransferase family protein3e-3At2g44660transferase, transferring glycosyl groups / transferase, transferring hexosyl groupsO.I.H.G.S.X.
0.6787.2Os06g0199800At1g56590-GPCR, family 2, secretin-like protein2e-7At1g48270GCR1 (G-PROTEIN-COUPLED RECEPTOR 1)O.I.H.G.S.X.
0.6787.2Os06g0724300At1g56590-Protein of unknown function DUF616 family protein3e-16At4g38500unknown proteinO.I.H.G.S.X.
0.5068.0Os10g0489100At1g56590-Protein arginine N-methyltransferase-like protein2e-7At3g20020PRMT6 (PROTEIN ARGININE METHYLTRANSFERASE 6)O.I.H.G.S.X.
0.5068.0Os04g0544900At1g56590-Alg9-like mannosyltransferase family protein2e-26At1g02145transferase, transferring glycosyl groupsO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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