| Gene ID | Zm.13202.1.A1_at |
| Gene name | hypothetical protein LOC100273129 |
| Homology with Arabidopsis | Similar to At1g56590: clathrin adaptor complexes medium subunit family protein (HF=1e-8) |
| Module size | 6 genes |
| NF | 0.70 |
| %ile | 91.6 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 99.0 | 0.99 | Zm.13202.1.A1_at | CA403491 | hypothetical protein LOC100273129 | - | 1e-8 | At1g56590 | clathrin adaptor complexes medium subunit family protein | O.I. | H.G. | S.X. | |
| 0.67 | 85.8 | 0.98 | Zm.737.2.A1_at | AI746142 | - | - | 4e-6 | At5g60360 | AALP (Arabidopsis aleurain-like protease) | O.I. | H.G. | S.X. | |
| 0.61 | 79.5 | 0.98 | Zm.3707.1.A1_at | AY107773.1 | vacuolar cation/proton exchanger 2 | - | 1e-4 | At3g13320 | CAX2 (CATION EXCHANGER 2) | O.I. | H.G. | S.X. | |
| 0.61 | 79.5 | 0.98 | Zm.2602.1.S1_at | AY109922.1 | hypothetical protein LOC100217277 | - | 1e-2 | At5g24340 | 3'-5' exonuclease domain-containing protein | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.98 | Zm.5729.1.A1_at | AI637125 | peptidoglycan binding domain containing protein | - | 3e-23 | At4g13670 | PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5) | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.99 | Zm.17172.1.A1_at | AI664919 | - | - | 2e+0 | At1g55675 | unknown protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 16.9 | 99.1 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 16.8 | 99.1 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 16.4 | 99.0 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 13.8 | 98.8 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.8 | 98.7 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.6 | 98.6 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.6 | 98.3 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.4 | 98.3 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.7 | 97.9 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.3 | 94.7 | GSM320457 | protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.50 | 68.0 | Os05g0383100 | At1g56590 | - | Clathrin adaptor complex, medium chain familyprotein | 3e-7 | At1g56590 | clathrin adaptor complexes medium subunit family protein | O.I. | H.G. | S.X. | |
| 0.73 | 91.1 | Os02g0688500 | At1g56590 | - | ALG6, ALG8 glycosyltransferase family protein | 3e-3 | At2g44660 | transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | Os06g0199800 | At1g56590 | - | GPCR, family 2, secretin-like protein | 2e-7 | At1g48270 | GCR1 (G-PROTEIN-COUPLED RECEPTOR 1) | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | Os06g0724300 | At1g56590 | - | Protein of unknown function DUF616 family protein | 3e-16 | At4g38500 | unknown protein | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | Os10g0489100 | At1g56590 | - | Protein arginine N-methyltransferase-like protein | 2e-7 | At3g20020 | PRMT6 (PROTEIN ARGININE METHYLTRANSFERASE 6) | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | Os04g0544900 | At1g56590 | - | Alg9-like mannosyltransferase family protein | 2e-26 | At1g02145 | transferase, transferring glycosyl groups | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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