Co-expression analysis

Gene ID Zm.13202.1.A1_at
Gene name hypothetical protein LOC100273129
Homology with ArabidopsisSimilar to At1g56590: clathrin adaptor complexes medium subunit family protein (HF=1e-8)
Module size 6 genes
NF 0.70
%ile 91.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.99Zm.13202.1.A1_atCA403491hypothetical protein LOC100273129-1e-8At1g56590clathrin adaptor complexes medium subunit family proteinO.I.H.G.S.X.
0.6785.80.98Zm.737.2.A1_atAI746142--4e-6At5g60360AALP (Arabidopsis aleurain-like protease)O.I.H.G.S.X.
0.6179.50.98Zm.3707.1.A1_atAY107773.1vacuolar cation/proton exchanger 2-1e-4At3g13320CAX2 (CATION EXCHANGER 2)O.I.H.G.S.X.
0.6179.50.98Zm.2602.1.S1_atAY109922.1hypothetical protein LOC100217277-1e-2At5g243403'-5' exonuclease domain-containing proteinO.I.H.G.S.X.
0.5065.70.98Zm.5729.1.A1_atAI637125peptidoglycan binding domain containing protein-3e-23At4g13670PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5)O.I.H.G.S.X.
0.5065.70.99Zm.17172.1.A1_atAI664919--2e+0At1g55675unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.999.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.899.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.499.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig9665_at, orthologous to the query gene, Zm.13202.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9095.7Contig9665_atAt1g56590--6e+0At4g12700unknown proteinO.I.H.G.S.X.
0.7086.0Contig2946_atAt1g56590--5e-5At5g03630ATMDAR2O.I.H.G.S.X.
0.6985.5Contig5574_atAt1g56590--2e-11At4g30210ATR2 (ARABIDOPSIS P450 REDUCTASE 2)O.I.H.G.S.X.
0.6885.1Contig14143_s_atAt1g56590--2e-2At3g19900unknown proteinO.I.H.G.S.X.
0.6681.5Contig4494_s_atAt1g56590--5e+0At5g55508unknown proteinO.I.H.G.S.X.
0.6480.9HV05M01u_x_atAt1g56590--8e+0At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)O.I.H.G.S.X.
0.6279.1Contig14618_atAt1g56590--1e+0At1g49140NADH-ubiquinone oxidoreductase-relatedO.I.H.G.S.X.
0.6279.1Contig3963_s_atAt1g56590--7e-39At4g19210ATRLI2O.I.H.G.S.X.
0.6178.7Contig5342_atAt1g56590--4e-3At3g56150EIF3C (EUKARYOTIC TRANSLATION INITIATION FACTOR 3C)O.I.H.G.S.X.
0.5774.9Contig8511_atAt1g56590--5e+0At5g44850-O.I.H.G.S.X.
0.5674.3HVSMEa0014L12r2_atAt1g56590--1e+1At5g36920unknown proteinO.I.H.G.S.X.
0.5572.0Contig8375_atAt1g56590--1e-37At3g23300dehydration-responsive protein-relatedO.I.H.G.S.X.
0.5470.3Contig570_s_atAt1g56590--3e-23At1g09200histone H3O.I.H.G.S.X.
0.5470.3Contig8956_atAt1g56590--7e-3At1g64900CYP89A2 (CYTOCHROME P450 89A2)O.I.H.G.S.X.
0.5369.7Contig8436_s_atAt1g56590--7e-2At5g40950RPL27 (RIBOSOMAL PROTEIN LARGE SUBUNIT 27)O.I.H.G.S.X.
0.5268.3Contig5242_atAt1g56590--3e-1At2g30560glycine-rich proteinO.I.H.G.S.X.
0.5167.5Contig5496_atAt1g56590--3e-3At3g44190pyridine nucleotide-disulphide oxidoreductase family proteinO.I.H.G.S.X.
0.5167.5HA28J12r_s_atAt1g56590--1e+0At3g23255unknown proteinO.I.H.G.S.X.
0.5066.9Contig9955_atAt1g56590--3e-1At2g23310ATRER1C1O.I.H.G.S.X.
0.4963.7Contig9809_atAt1g56590--3e-1At1g63820-O.I.H.G.S.X.
0.4963.7Contig13159_atAt1g56590--2e-16At3g01780TPLATEO.I.H.G.S.X.
0.4762.2Contig6330_atAt1g56590--1e+0At2g18160ATBZIP2 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 2)O.I.H.G.S.X.
0.4762.2Contig4217_atAt1g56590--3e-71At5g03290isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putativeO.I.H.G.S.X.
0.4559.3Contig6966_atAt1g56590--5e-29At1g09330unknown proteinO.I.H.G.S.X.
0.4458.9Contig3856_atAt1g56590--1e-19At1g52600signal peptidase, putativeO.I.H.G.S.X.
0.4458.9Contig3663_atAt1g56590--2e+0At3g04640glycine-rich proteinO.I.H.G.S.X.
0.4356.4Contig6150_atAt1g56590--3e-2At3g56290unknown proteinO.I.H.G.S.X.
0.4356.4Contig8440_atAt1g56590--5e-1At1g09155AtPP2-B15 (Phloem protein 2-B15)O.I.H.G.S.X.
0.4356.4Contig4444_atAt1g56590--3e-3At2g40960nucleic acid bindingO.I.H.G.S.X.
0.4153.9Contig9440_s_atAt1g56590--4e-4At3g18760ribosomal protein S6 family proteinO.I.H.G.S.X.
0.4153.9Contig8064_atAt1g56590--1e-1At4g17670senescence-associated protein-relatedO.I.H.G.S.X.
0.4053.1Contig15548_atAt1g56590--2e-7At2g38000chaperone protein dnaJ-relatedO.I.H.G.S.X.
0.3849.5Contig12580_atAt1g56590--1e+0At5g28640AN3 (ANGUSTIFOLIA 3)O.I.H.G.S.X.
0.3545.1Contig14183_s_atAt1g56590--1e+0At3g05170phosphoglycerate/bisphosphoglycerate mutase family proteinO.I.H.G.S.X.
0.3240.3Contig4592_s_atAt1g56590--3e-22At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)O.I.H.G.S.X.
0.3240.3Contig44_atAt1g56590--3e-23At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)O.I.H.G.S.X.
0.2935.5Contig12841_atAt1g56590--3e-5At1g15140oxidoreductase NAD-binding domain-containing proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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