Co-expression analysis

Gene ID Zm.13202.1.A1_at
Gene name hypothetical protein LOC100273129
Homology with ArabidopsisSimilar to At1g56590: clathrin adaptor complexes medium subunit family protein (HF=1e-8)
Module size 6 genes
NF 0.70
%ile 91.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.99Zm.13202.1.A1_atCA403491hypothetical protein LOC100273129-1e-8At1g56590clathrin adaptor complexes medium subunit family proteinO.I.H.G.S.X.
0.6785.80.98Zm.737.2.A1_atAI746142--4e-6At5g60360AALP (Arabidopsis aleurain-like protease)O.I.H.G.S.X.
0.6179.50.98Zm.3707.1.A1_atAY107773.1vacuolar cation/proton exchanger 2-1e-4At3g13320CAX2 (CATION EXCHANGER 2)O.I.H.G.S.X.
0.6179.50.98Zm.2602.1.S1_atAY109922.1hypothetical protein LOC100217277-1e-2At5g243403'-5' exonuclease domain-containing proteinO.I.H.G.S.X.
0.5065.70.98Zm.5729.1.A1_atAI637125peptidoglycan binding domain containing protein-3e-23At4g13670PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5)O.I.H.G.S.X.
0.5065.70.99Zm.17172.1.A1_atAI664919--2e+0At1g55675unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.999.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.899.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.499.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.49577.1.S1_at, orthologous to the query gene, Zm.13202.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8793.2GmaAffx.49577.1.S1_atAt1g56590--4e-20At1g56590clathrin adaptor complexes medium subunit family proteinO.I.H.G.S.X.
0.5878.8Gma.2905.1.S1_atAt1g56590--4e-172At4g29040RPT2a (regulatory particle AAA-ATPase 2a)O.I.H.G.S.X.
0.5778.8Gma.6464.1.S1_s_atAt1g56590--4e-41At2g19790clathrin adaptor complex small chain family proteinO.I.H.G.S.X.
0.5273.1GmaAffx.8005.2.S1_atAt1g56590--4e-67At2g03120ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE)O.I.H.G.S.X.
0.4968.3GmaAffx.7362.1.S1_atAt1g56590--1e-10At5g10880tRNA synthetase-related / tRNA ligase-relatedO.I.H.G.S.X.
0.4968.3Gma.448.2.S1_a_atAt1g56590--3e-21At3g60820PBF1O.I.H.G.S.X.
0.4867.7Gma.4270.1.S1_s_atAt1g56590--2e-19At3g46010ADF1 (ACTIN DEPOLYMERIZING FACTOR 1)O.I.H.G.S.X.
0.4665.5Gma.9587.1.A1_atAt1g56590--6e+0At5g47060senescence-associated protein-relatedO.I.H.G.S.X.
0.4563.9Gma.4484.1.S1_atAt1g56590--5e-37At1g16780vacuolar-type H+-translocating inorganic pyrophosphatase, putativeO.I.H.G.S.X.
0.4259.3Gma.4383.1.S1_a_atAt1g56590--9e-34At1g64520RPN12a (Regulatory Particle non-ATPase 12a)O.I.H.G.S.X.
0.4158.1Gma.745.1.S1_a_atAt1g56590--3e-11At5g67590FRO1 (FROSTBITE1)O.I.H.G.S.X.
0.3853.3Gma.11223.1.S1_atAt1g56590--4e-169At3g28710H+-transporting two-sector ATPase, putativeO.I.H.G.S.X.
0.3650.8Gma.6495.1.S1_atAt1g56590--5e-51At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)O.I.H.G.S.X.
0.3650.8Gma.8460.1.S1_atAt1g56590acyl-CoA oxidase-7e-39At4g16760ACX1 (ACYL-COA OXIDASE 1)O.I.H.G.S.X.
0.3548.6GmaAffx.72609.1.S1_atAt1g56590--8e-16At1g28120-O.I.H.G.S.X.
0.3548.6GmaAffx.89191.1.A1_atAt1g56590--1e-20At3g0852060S ribosomal protein L41 (RPL41D)O.I.H.G.S.X.
0.3243.7GmaAffx.87332.1.S1_s_atAt1g56590--5e-35At1g09330unknown proteinO.I.H.G.S.X.
0.3142.2Gma.10826.2.S1_atAt1g56590--8e-9At5g1613040S ribosomal protein S7 (RPS7C)O.I.H.G.S.X.
0.3040.4Gma.7525.1.A1_atAt1g56590--1e-25At1g73430sec34-like family proteinO.I.H.G.S.X.
0.2839.0Gma.4022.1.S1_atAt1g56590--5e-26At1g06890transporter-relatedO.I.H.G.S.X.
0.2839.0Gma.17700.2.S1_atAt1g56590--2e-19At2g20760protein binding / structural moleculeO.I.H.G.S.X.
0.2735.7Gma.8031.1.S1_atAt1g56590--4e-76At4g12590unknown proteinO.I.H.G.S.X.
0.2735.7Gma.5581.1.S1_atAt1g56590--8e-53At3g27430PBB1O.I.H.G.S.X.
0.2633.9Gma.8179.1.S1_atAt1g56590--2e-19At3g18860transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2633.9Gma.6234.1.S1_atAt1g56590--3e-31At3g21865PEX22 (peroxin 22)O.I.H.G.S.X.
0.2430.9GmaAffx.92081.1.S1_atAt1g56590--1e-3At1g47420-O.I.H.G.S.X.
0.2430.9Gma.2945.1.S1_atAt1g56590--2e-40At1g47830clathrin coat assembly protein, putativeO.I.H.G.S.X.
0.2430.9Gma.4335.1.S1_atAt1g56590--8e-3At2g17190ubiquitin family proteinO.I.H.G.S.X.
0.2329.9Gma.17905.2.S1_atAt1g56590--8e-37At4g01320ATSTE24O.I.H.G.S.X.
0.2025.1Gma.5762.1.S1_atAt1g56590aminoalcoholphosphotransferase-2e-47At1g13560AAPT1 (AMINOALCOHOLPHOSPHOTRANSFERASE 1)O.I.H.G.S.X.
0.1822.3GmaAffx.92496.1.S1_s_atAt1g56590--1e-75At1g78870UBC35 (UBIQUITIN-CONJUGATING ENZYME 35)O.I.H.G.S.X.
0.1619.7Gma.16051.1.S1_atAt1g56590--6e-25At3g04780-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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