Co-expression analysis

Gene ID Zm.13164.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g22380: AtUGT85A3 (UDP-glucosyl transferase 85A3) (HF=8e-1)
Module size 6 genes
NF 0.68
%ile 89.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5065.70.98Zm.13164.1.A1_atCD437268--8e-1At1g22380AtUGT85A3 (UDP-glucosyl transferase 85A3)O.I.H.G.S.X.
0.8395.60.98Zm.12183.1.A1_atAW065430--1e+0At1g12020unknown proteinO.I.H.G.S.X.
0.7389.90.98Zm.6057.1.S1_atCD437092glycine-rich protein 2b-5e-1At4g38680GRP2 (GLYCINE RICH PROTEIN 2)O.I.H.G.S.X.
0.6785.80.98ZmAffx.467.1.A1_atAI677406calmodulin-like-1e-2At3g43810CAM7 (CALMODULIN 7)O.I.H.G.S.X.
0.5571.60.98Zm.6084.2.S1_atAY105635.1--5e-28At3g13235ubiquitin family proteinO.I.H.G.S.X.
0.4352.80.98Zm.17848.1.A1_s_atCK786759hypothetical protein LOC100279789-2e+1At5g27980seed maturation family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.798.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.798.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.598.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.196.8GSM320458protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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