Co-expression analysis

Gene ID Zm.13129.1.S1_at
Gene name 36.4 kDa proline-rich protein
Homology with ArabidopsisSimilar to At4g11430: hydroxyproline-rich glycoprotein family protein (HF=2e-1)
Module size 35 genes
NF 0.74
%ile 94.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.60.89Zm.13129.1.S1_atAY105001.136.4 kDa proline-rich protein-2e-1At4g11430hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.8896.70.94Zm.3221.1.S1_atCF035537--5e-39At5g45140NRPC2O.I.H.G.S.X.
0.8495.80.90Zm.12995.1.A1_atCA403012hypothetical protein LOC100276997-8e-3At2g34070unknown proteinO.I.H.G.S.X.
0.8395.60.92Zm.15800.4.A1_a_atCK370627actin-depolymerizing factor 3-3e-11At5g59890ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)O.I.H.G.S.X.
0.8294.60.92Zm.17200.1.S1_atCK145428--3e+0At4g24060Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.
0.8294.60.92Zm.7012.4.S1_x_atM95064.1Ribosomal protein S8-5e-12At5g5924040S ribosomal protein S8 (RPS8B)O.I.H.G.S.X.
0.8294.60.93Zm.7000.1.A1_atCK827521hypothetical protein LOC100275012 /// hypothetical protein LOC100276117 /// hypothetical protein LOC100277141 /// ustilago maydis induced11-5e+0At2g42940DNA-binding family proteinO.I.H.G.S.X.
0.8194.30.93Zm.13605.1.S1_atCO522133serine--glyoxylate aminotransferase-1e-14At2g13360AGT (ALANINE:GLYOXYLATE AMINOTRANSFERASE)O.I.H.G.S.X.
0.8194.30.93Zm.12898.1.A1_atCA401243hypothetical protein LOC100274425-8e+0At3g25950-O.I.H.G.S.X.
0.8094.00.92Zm.15553.1.S1_atCD219266hypothetical protein LOC100193348-3e-7At2g17720oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.8094.00.94Zm.7422.1.A1_atCO525742anthocyanidin 3-O-glucosyltransferase-2e+0At2g0125060S ribosomal protein L7 (RPL7B)O.I.H.G.S.X.
0.7892.50.92Zm.3519.1.A1_atAW053043--2e-1At2g20613unknown proteinO.I.H.G.S.X.
0.7892.50.93Zm.6822.2.S1_a_atCO518852receptor expression-enhancing protein 3-3e-2At5g42560abscisic acid-responsive HVA22 family proteinO.I.H.G.S.X.
0.7892.50.93Zm.12869.1.A1_atCA400799--2e+0At1g75830LCR67O.I.H.G.S.X.
0.7590.80.92Zm.6822.2.A1_a_atCO518852--3e-2At5g42560abscisic acid-responsive HVA22 family proteinO.I.H.G.S.X.
0.7590.80.90Zm.3986.1.A1_atAY108648.1vacuolar ATPase subunit H protein-4e-9At3g42050vacuolar ATP synthase subunit H family proteinO.I.H.G.S.X.
0.7490.30.91Zm.18467.1.S1_atAY107639.1--5e+0At5g35920CYP79A4PO.I.H.G.S.X.
0.7490.30.93Zm.14354.2.A1_a_atCA399715--2e-9At5g11560catalyticO.I.H.G.S.X.
0.7389.90.92Zm.4811.1.A1_x_atCF624047UDP-N-acetylglucosamine pyrophosphorylase-6e-5At2g35020UTP--glucose-1-phosphate uridylyltransferase family proteinO.I.H.G.S.X.
0.7087.00.91Zm.4508.1.A1_atCF013098hypothetical protein LOC100192829-2e-20At2g05990MOD1 (MOSAIC DEATH 1)O.I.H.G.S.X.
0.6986.50.90--O.I.H.G.S.X.
0.6986.50.92Zm.17855.1.S1_a_atBM080808hypothetical protein LOC100192583 /// NADH-ubiquinone oxidoreductase 20 kDa subunit /// NADH dehydrogenase2-3e-64At5g11770NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrialO.I.H.G.S.X.
0.6986.50.93Zm.3990.1.S1_atCF244104--5e-4At5g49830-O.I.H.G.S.X.
0.6986.50.91Zm.12796.1.A1_atCA403456hypothetical protein LOC100276862-2e-7At1g07040unknown proteinO.I.H.G.S.X.
0.6986.50.92Zm.3350.2.A1_atCA400679U6 snRNA-associated Sm-like protein LSm4-7e-34At5g27720emb1644 (embryo defective 1644)O.I.H.G.S.X.
0.6886.10.91Zm.7425.1.A1_atBM080593--4e-1At4g09860unknown proteinO.I.H.G.S.X.
0.6886.10.91Zm.18503.1.A1_atCO518080--2e+1At3g12145FLR1O.I.H.G.S.X.
0.6886.10.90ZmAffx.160.1.S1_atAI668152--8e-1At4g24380unknown proteinO.I.H.G.S.X.
0.6785.80.92Zm.2532.1.A1_atCF624878--1e+0At5g21960AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.6682.30.92Zm.13205.3.A1_atAI670579--6e-2At1g04645self-incompatibility protein-relatedO.I.H.G.S.X.
0.6582.10.91Zm.5962.1.S1_atAY241545.1glyoxalase I-1e-17At1g11840ATGLX1 (GLYOXALASE I HOMOLOG)O.I.H.G.S.X.
0.6381.10.91Zm.2640.1.A1_atCF628991hypothetical protein LOC100217097-1e-1At5g27400unknown proteinO.I.H.G.S.X.
0.6279.80.92Zm.6108.2.S1_atCA399319--5e-37At1g15290bindingO.I.H.G.S.X.
0.6077.80.92Zm.1837.1.S1_atCF014756cp protein-1e-2At5g01610unknown proteinO.I.H.G.S.X.
0.5976.10.91Zm.15680.1.A1_atCA405039hypothetical protein LOC100277476-7e+0At3g43153cAMP-dependent protein kinase inhibitor-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.598.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.097.7GSM162264Mutant 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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