Co-expression analysis

Gene ID Zm.13103.1.S1_at
Gene name hypothetical protein LOC100191205
Homology with ArabidopsisSimilar to At5g49710: unknown protein (HF=2e-4)
Module size 8 genes
NF 0.43
%ile 50.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4759.90.95Zm.13103.1.S1_atCO534624hypothetical protein LOC100191205-2e-4At5g49710unknown proteinO.I.H.G.S.X.
0.5674.40.96Zm.14825.1.S1_atAJ430639.1m25 protein-5e-1At4g09960STK (SEEDSTICK)O.I.H.G.S.X.
0.4658.40.97Zm.3136.1.A1_atCF625170hypothetical protein LOC100192461-9e-66At4g13930SHM4 (serine hydroxymethyltransferase 4)O.I.H.G.S.X.
0.4352.80.97Zm.2895.9.A1_a_atAI67742160S ribosomal protein L44-5e-45At4g1432060S ribosomal protein L36a/L44 (RPL36aB)O.I.H.G.S.X.
0.4048.50.97Zm.2681.1.A1_atBM073609--5e+0At5g42990UBC18 (ubiquitin-conjugating enzyme 18)O.I.H.G.S.X.
0.3945.60.96Zm.5810.1.A1_atBM380578pop3 peptide-5e-4At3g17210HS1 (HEAT STABLE PROTEIN 1)O.I.H.G.S.X.
0.3641.30.97Zm.17598.1.S1_atCK370536--6e-1At3g26740CCL (CCR-LIKE)O.I.H.G.S.X.
0.2521.30.96Zm.6931.1.S1_a_atAY588275.1hypothetical LOC542168-2e-4At2g36310URH1 (URIDINE-RIBOHYDROLASE 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.398.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM320443protocol: mRNA - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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