Co-expression analysis

Gene ID Zm.13095.1.A1_at
Gene name hypothetical protein LOC100217092
Homology with ArabidopsisSimilar to At2g04530: CPZ (HF=1e-7)
Module size 6 genes
NF 0.42
%ile 48.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.99Zm.13095.1.A1_atCA404407hypothetical protein LOC100217092-1e-7At2g04530CPZO.I.H.G.S.X.
0.6785.80.99ZmAffx.801.1.S1_atAI770364--3e+0At2g02990RNS1 (RIBONUCLEASE 1)O.I.H.G.S.X.
0.5065.70.99ZmAffx.801.1.A1_atAI770364--3e+0At2g02990RNS1 (RIBONUCLEASE 1)O.I.H.G.S.X.
0.3029.80.99ZmAffx.1400.1.S1_at40794996-75--3e+0At4g05631unknown proteinO.I.H.G.S.X.
0.2318.61.00ZmAffx.1370.1.S1_at11990232-98--5e+0At5g42955unknown proteinO.I.H.G.S.X.
0.1811.60.99ZmAffx.175.1.A1_atAI668276--3e+0At3g06820mov34 family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.998.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM320473protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1612907_at, orthologous to the query gene, Zm.13095.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9399.21612907_atAt2g04530--7e-27At2g04530CPZO.I.H.G.S.X.
0.6484.71615191_atAt2g04530hypothetical protein LOC100254381-5e-32At4g37510ribonuclease III family proteinO.I.H.G.S.X.
0.6384.31609644_atAt2g04530hypothetical protein LOC100260722 /// hypothetical protein LOC100260971 /// hypothetical protein LOC100262489-2e-14At2g24280serine carboxypeptidase S28 family proteinO.I.H.G.S.X.
0.6384.31612100_atAt2g04530hypothetical protein LOC100248200-4e+0At5g03840TFL1 (TERMINAL FLOWER 1)O.I.H.G.S.X.
0.5475.71621525_atAt2g04530--2e-12At1g67660DNA binding / nucleaseO.I.H.G.S.X.
0.5173.21613696_atAt2g04530hypothetical protein LOC100242891-1e+0At2g25720unknown proteinO.I.H.G.S.X.
0.4969.31617670_atAt2g04530hypothetical protein LOC100260576-8e-90At2g21170TIM (TRIOSEPHOSPHATE ISOMERASE)O.I.H.G.S.X.
0.4868.81613103_atAt2g04530hypothetical protein LOC100249419-3e+0At5g16440IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)O.I.H.G.S.X.
0.4767.71612750_atAt2g04530hypothetical protein LOC100248749-2e+0At3g55390integral membrane family proteinO.I.H.G.S.X.
0.4666.51614345_s_atAt2g04530hypothetical protein LOC100248615-1e-19At4g26670mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinO.I.H.G.S.X.
0.4464.11612576_atAt2g04530hypothetical protein LOC100242562-4e-2At1g47720OSB1 (Organellar Single-stranded)O.I.H.G.S.X.
0.4158.71620303_atAt2g04530hypothetical protein LOC100242724-4e-6At3g18420tetratricopeptide repeat (TPR)-containing proteinO.I.H.G.S.X.
0.4158.71609396_atAt2g04530hypothetical protein LOC100249947-3e-10At2g32180PTAC18 (PLASTID TRANSCRIPTIONALLY ACTIVE 18)O.I.H.G.S.X.
0.3853.61606449_atAt2g04530hypothetical protein LOC100268079-6e-2At4g29170ATMND1O.I.H.G.S.X.
0.3853.61608841_atAt2g04530hypothetical protein LOC100242500-2e+0At4g01670unknown proteinO.I.H.G.S.X.
0.3751.71616385_atAt2g04530hypothetical protein LOC100250293-4e+0At4g23080unknown proteinO.I.H.G.S.X.
0.3650.71614308_atAt2g04530hypothetical protein LOC100265443-2e-37At5g48470unknown proteinO.I.H.G.S.X.
0.3650.71618846_atAt2g04530hypothetical protein LOC100258439-2e-15At3g45050unknown proteinO.I.H.G.S.X.
0.3446.81621140_atAt2g04530hypothetical protein LOC100266085-2e+0At3g03930protein kinase-relatedO.I.H.G.S.X.
0.3345.71620485_atAt2g04530hypothetical protein LOC100242692-3e-1At3g52910AtGRF4 (GROWTH-REGULATING FACTOR 4)O.I.H.G.S.X.
0.2937.71615296_atAt2g04530hypothetical protein LOC100247377-1e-4At4g20760short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.2530.51614467_atAt2g04530hypothetical protein LOC100266972-7e-25At2g22230beta-hydroxyacyl-ACP dehydratase, putativeO.I.H.G.S.X.
0.2428.71617630_atAt2g04530hypothetical protein LOC100251032-3e-10At3g52750FTSZ2-2O.I.H.G.S.X.
0.2428.71622697_atAt2g04530--1e+0At1g31160zinc-binding protein, putative / protein kinase C inhibitor, putativeO.I.H.G.S.X.
0.1718.21609573_atAt2g04530hypothetical protein LOC100264499-1e+0At3g50450HR1 (HOMOLOG OF RPW8 1)O.I.H.G.S.X.
0.1515.61622145_atAt2g04530hypothetical protein LOC100268128-6e+0At3g17480F-box family proteinO.I.H.G.S.X.
0.1414.41620150_atAt2g04530hypothetical protein LOC100254773-9e-8At1g64810APO1 (ACCUMULATION OF PHOTOSYSTEM ONE 1)O.I.H.G.S.X.
0.1010.31617024_atAt2g04530hypothetical protein LOC100249323-9e-14At4g15560CLA1 (CLOROPLASTOS ALTERADOS 1)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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