Co-expression analysis

Gene ID Zm.13095.1.A1_at
Gene name hypothetical protein LOC100217092
Homology with ArabidopsisSimilar to At2g04530: CPZ (HF=1e-7)
Module size 6 genes
NF 0.42
%ile 48.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.99Zm.13095.1.A1_atCA404407hypothetical protein LOC100217092-1e-7At2g04530CPZO.I.H.G.S.X.
0.6785.80.99ZmAffx.801.1.S1_atAI770364--3e+0At2g02990RNS1 (RIBONUCLEASE 1)O.I.H.G.S.X.
0.5065.70.99ZmAffx.801.1.A1_atAI770364--3e+0At2g02990RNS1 (RIBONUCLEASE 1)O.I.H.G.S.X.
0.3029.80.99ZmAffx.1400.1.S1_at40794996-75--3e+0At4g05631unknown proteinO.I.H.G.S.X.
0.2318.61.00ZmAffx.1370.1.S1_at11990232-98--5e+0At5g42955unknown proteinO.I.H.G.S.X.
0.1811.60.99ZmAffx.175.1.A1_atAI668276--3e+0At3g06820mov34 family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.998.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM320473protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.211893.1.S1_at, orthologous to the query gene, Zm.13095.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8597.2PtpAffx.211893.1.S1_atAt2g04530hypothetical protein-2e-92At2g04530CPZO.I.H.G.S.X.
0.5984.9Ptp.5972.1.S1_s_atAt2g04530light harvesting-like protein 3-4e-44At5g47110lil3 protein, putativeO.I.H.G.S.X.
0.5279.4PtpAffx.160484.1.A1_s_atAt2g04530hypothetical protein-3e-13At5g11450oxygen-evolving complex-relatedO.I.H.G.S.X.
0.5078.6PtpAffx.209120.1.S1_atAt2g04530hypothetical protein-2e-12At1g13820hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.4774.6PtpAffx.25173.1.A1_a_atAt2g04530cytochrome P450-7e-9At3g53130LUT1 (LUTEIN DEFICIENT 1)O.I.H.G.S.X.
0.4572.3PtpAffx.16145.1.S1_atAt2g04530hypothetical protein-2e+0At2g22080unknown proteinO.I.H.G.S.X.
0.4572.3PtpAffx.205350.1.S1_atAt2g04530hypothetical protein-1e-72At4g37040MAP1D (METHIONINE AMINOPEPTIDASE 1D)O.I.H.G.S.X.
0.4471.9PtpAffx.274.1.S1_a_atAt2g04530hypothetical protein-3e-36At1g74970RPS9 (RIBOSOMAL PROTEIN S9)O.I.H.G.S.X.
0.4471.9Ptp.2596.1.S1_atAt2g04530hypothetical protein-2e-40At5g11450oxygen-evolving complex-relatedO.I.H.G.S.X.
0.4167.7PtpAffx.203693.1.S1_atAt2g04530hypothetical protein-4e-27At4g21770pseudouridine synthase family proteinO.I.H.G.S.X.
0.3762.3Ptp.6627.1.S1_atAt2g04530hypothetical protein-4e-17At5g5460050S ribosomal protein L24, chloroplast (CL24)O.I.H.G.S.X.
0.3661.6Ptp.205.3.A1_s_atAt2g04530--5e-9At3g53900uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putativeO.I.H.G.S.X.
0.3661.6Ptp.4887.1.A1_a_atAt2g04530hypothetical protein-4e-33At1g04420aldo/keto reductase family proteinO.I.H.G.S.X.
0.3661.6Ptp.5695.1.S1_a_atAt2g04530hypothetical protein-7e-21At1g48350ribosomal protein L18 family proteinO.I.H.G.S.X.
0.3458.3PtpAffx.214213.1.S1_atAt2g04530hypothetical protein-9e-50At2g31170SYCO ARATHO.I.H.G.S.X.
0.3052.0PtpAffx.39996.1.A1_atAt2g04530hypothetical protein-1e-28At1g31160zinc-binding protein, putative / protein kinase C inhibitor, putativeO.I.H.G.S.X.
0.2543.6PtpAffx.213506.1.S1_atAt2g04530hypothetical protein-3e-17At3g53460CP29O.I.H.G.S.X.
0.2543.6PtpAffx.53128.1.S1_atAt2g04530--7e-25At3g44890RPL9 (RIBOSOMAL PROTEIN L9)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera



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