Co-expression analysis

Gene ID Zm.13095.1.A1_at
Gene name hypothetical protein LOC100217092
Homology with ArabidopsisSimilar to At2g04530: CPZ (HF=1e-7)
Module size 6 genes
NF 0.42
%ile 48.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.99Zm.13095.1.A1_atCA404407hypothetical protein LOC100217092-1e-7At2g04530CPZO.I.H.G.S.X.
0.6785.80.99ZmAffx.801.1.S1_atAI770364--3e+0At2g02990RNS1 (RIBONUCLEASE 1)O.I.H.G.S.X.
0.5065.70.99ZmAffx.801.1.A1_atAI770364--3e+0At2g02990RNS1 (RIBONUCLEASE 1)O.I.H.G.S.X.
0.3029.80.99ZmAffx.1400.1.S1_at40794996-75--3e+0At4g05631unknown proteinO.I.H.G.S.X.
0.2318.61.00ZmAffx.1370.1.S1_at11990232-98--5e+0At5g42955unknown proteinO.I.H.G.S.X.
0.1811.60.99ZmAffx.175.1.A1_atAI668276--3e+0At3g06820mov34 family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.998.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM320473protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.64861.1.S1_at, orthologous to the query gene, Zm.13095.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5071.7GmaAffx.64861.1.S1_atAt2g04530--3e-3At3g63230unknown proteinO.I.H.G.S.X.
0.4057.1GmaAffx.81873.1.S1_atAt2g04530--2e+0At5g62280unknown proteinO.I.H.G.S.X.
0.4057.1GmaAffx.57464.1.A1_atAt2g04530--6e-1At3g53490unknown proteinO.I.H.G.S.X.
0.3243.7GmaAffx.40657.1.S1_atAt2g04530--2e-5At5g06510NF-YA10 (NUCLEAR FACTOR Y, SUBUNIT A10)O.I.H.G.S.X.
0.3243.7GmaAffx.43786.2.S1_atAt2g04530--4e-12At2g17820ATHK1 (histidine kinase 1)O.I.H.G.S.X.
0.2839.0GmaAffx.88414.1.S1_atAt2g04530--2e-11At5g10030TGA4 (TGACG MOTIF-BINDING FACTOR 4)O.I.H.G.S.X.
0.2532.6GmaAffx.73659.1.S1_atAt2g04530--9e-1At3g45670protein kinase-relatedO.I.H.G.S.X.
0.2228.1GmaAffx.46842.1.S1_atAt2g04530--2e-1At3g17120unknown proteinO.I.H.G.S.X.
0.1822.3GmaAffx.80898.1.S1_atAt2g04530--3e+0At3g04700unknown proteinO.I.H.G.S.X.
0.1721.2Gma.9966.1.S1_atAt2g04530--4e-1At3g55790unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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