Co-expression analysis

Gene ID	Zm.13082.1.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At3g49800: BSD domain-containing protein (HF=1e-1)
Module size	6 genes
NF	0.62
%ile	83.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	89.9	0.93	Zm.13082.1.S1_a_at	CD438478	-	-	1e-1	At3g49800	BSD domain-containing protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.89	Zm.12854.1.A1_at	CA400433	hypothetical protein LOC100191282	-	3e-3	At3g15290	3-hydroxybutyryl-CoA dehydrogenase, putative	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.91	Zm.15678.1.A1_a_at	CD440195	hypothetical protein LOC100192926	-	7e+0	At4g18280	glycine-rich cell wall protein-related	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.93	Zm.18823.1.A1_at	CO527014	-	-	2e+0	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.91	Zm.3960.1.S1_at	AY106760.1	chaperone protein dnaJ 13	-	7e-8	At2g35720	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.91	Zm.15914.2.A1_a_at	AF124739.1	hypothetical LOC541770	-	2e-12	At2g27200	GTP-binding family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.2	98.2	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.0	98.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.9	98.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.6	98.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.6	98.1	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.9	97.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.8	97.9	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.4	97.8	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.3	91.7	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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