Co-expression analysis

Gene ID Zm.12968.1.S1_at
Gene name pyruvate dehydrogenase E1 component subunit beta
Homology with ArabidopsisSimilar to At1g30120: PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA) (HF=3e-62)
Module size 12 genes
NF 0.66
%ile 87.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5166.40.96Zm.12968.1.S1_atCO528187pyruvate dehydrogenase E1 component subunit beta-3e-62At1g30120PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA)O.I.H.G.S.X.
0.7590.80.97Zm.5917.1.A1_a_atBM337345hypothetical protein LOC100192679-2e+0At1g27970NTF2B (NUCLEAR TRANSPORT FACTOR 2B)O.I.H.G.S.X.
0.7389.90.97ZmAffx.240.1.S1_atAI670252--3e+0At5g11610exostosin family proteinO.I.H.G.S.X.
0.7188.20.97Zm.5388.1.S1_atAW453245hypothetical protein LOC100193632-6e-23At3g09180unknown proteinO.I.H.G.S.X.
0.6785.80.97Zm.1546.3.A1_x_atCK369824--1e-6At1g15270-O.I.H.G.S.X.
0.6785.80.97Zm.16482.2.A1_atBM337760--9e-19At3g0963060S ribosomal protein L4/L1 (RPL4A)O.I.H.G.S.X.
0.6481.70.98ZmAffx.1097.1.S1_atAW120085--1e+1At5g25770unknown proteinO.I.H.G.S.X.
0.6481.70.98Zm.5441.1.S1_atCO528962hypothetical protein LOC100274317-3e+0At3g23130SUP (SUPERMAN)O.I.H.G.S.X.
0.6077.80.98Zm.6418.1.S1_atAY108322.1hypothetical protein LOC100216693-2e-1At3g44580unknown proteinO.I.H.G.S.X.
0.6077.80.98Zm.5220.1.S1_atAI614989hypothetical protein LOC100279470-1e+0At5g36120CCB3 (COFACTOR ASSEMBLY, COMPLEX C (B6F),)O.I.H.G.S.X.
0.5976.10.97Zm.6439.1.A1_atAF076955.1eucaryotic initiation factor7-3e-12At5g35620LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1)O.I.H.G.S.X.
0.5674.40.97Zm.18903.1.A1_atCO530915--7e-2At5g07400forkhead-associated domain-containing protein / FHA domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.499.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.899.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.198.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.598.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.498.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.398.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.298.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.692.9GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage