Co-expression analysis

Gene ID Zm.12898.1.A1_at
Gene name hypothetical protein LOC100274425
Homology with ArabidopsisSimilar to At3g25950: - (HF=8e+0)
Module size 12 genes
NF 0.84
%ile 98.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7992.80.97Zm.12898.1.A1_atCA401243hypothetical protein LOC100274425-8e+0At3g25950-O.I.H.G.S.X.
0.9699.80.97Zm.4811.1.A1_x_atCF624047UDP-N-acetylglucosamine pyrophosphorylase-6e-5At2g35020UTP--glucose-1-phosphate uridylyltransferase family proteinO.I.H.G.S.X.
0.8896.70.96Zm.6822.2.S1_a_atCO518852receptor expression-enhancing protein 3-3e-2At5g42560abscisic acid-responsive HVA22 family proteinO.I.H.G.S.X.
0.8896.70.97Zm.5962.1.S1_atAY241545.1glyoxalase I-1e-17At1g11840ATGLX1 (GLYOXALASE I HOMOLOG)O.I.H.G.S.X.
0.8896.70.97Zm.3350.2.A1_atCA400679U6 snRNA-associated Sm-like protein LSm4-7e-34At5g27720emb1644 (embryo defective 1644)O.I.H.G.S.X.
0.8896.70.97Zm.3221.1.S1_atCF035537--5e-39At5g45140NRPC2O.I.H.G.S.X.
0.8696.30.97Zm.13188.3.S1_x_atBM076074hypothetical protein LOC100193240-8e-6At2g37270ATRPS5B (RIBOSOMAL PROTEIN 5B)O.I.H.G.S.X.
0.8194.30.97Zm.7422.1.A1_atCO525742anthocyanidin 3-O-glucosyltransferase-2e+0At2g0125060S ribosomal protein L7 (RPL7B)O.I.H.G.S.X.
0.7892.50.97Zm.15553.1.S1_atCD219266hypothetical protein LOC100193348-3e-7At2g17720oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.7288.60.97Zm.17200.1.S1_atCK145428--3e+0At4g24060Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.
0.7188.20.96Zm.14354.2.A1_a_atCA399715--2e-9At5g11560catalyticO.I.H.G.S.X.
0.6179.50.97Zm.14411.2.S1_atAY104410.1membrane steroid-binding protein 1-6e-10At3g48890ATMP2O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.898.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.898.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM253281ZM_8d_SG200_3Alu_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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