Co-expression analysis

Gene ID Zm.12794.1.A1_at
Gene name protein kinase domain containing protein
Homology with ArabidopsisSimilar to At5g53450: ORG1 (OBP3-responsive gene 1) (HF=8e-3)
Module size 9 genes
NF 0.53
%ile 69.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.00.96Zm.12794.1.A1_atAY109927.1protein kinase domain containing protein-8e-3At5g53450ORG1 (OBP3-responsive gene 1)O.I.H.G.S.X.
0.5976.10.97Zm.17271.8.A1_atBM34060240S ribosomal protein S10-3e-11At5g5265040S ribosomal protein S10 (RPS10C)O.I.H.G.S.X.
0.5369.10.98Zm.5372.1.S1_atAW000380secondary cell wall-related glycosyltransferase family 8-5e-15At3g18660PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1)O.I.H.G.S.X.
0.5369.10.98Zm.18339.1.A1_atCO049300--4e-4At4g18190ATPUP6O.I.H.G.S.X.
0.5065.70.97Zm.18389.1.S1_atCF625987--8e-34At1g02410cytochrome c oxidase assembly protein CtaG / Cox11 familyO.I.H.G.S.X.
0.5065.70.98Zm.5959.1.A1_atAI665952--1e-6At4g30720electron carrier/ oxidoreductaseO.I.H.G.S.X.
0.4048.50.97Zm.10187.1.S1_atCF634502hypothetical protein LOC100216724-9e-4At5g51460ATTPPAO.I.H.G.S.X.
0.3844.20.97Zm.12934.1.A1_a_atAY106367.1--2e+0At1g80200unknown proteinO.I.H.G.S.X.
0.3844.20.97Zm.12716.2.A1_atAI833884--3e+0At1g12630DNA binding / transcription activator/ transcription factorO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.798.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.895.5GSM206332Lower pulvinus 15 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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