Co-expression analysis

Gene ID Zm.12792.1.A1_at
Gene name hypothetical protein LOC100272306
Homology with ArabidopsisSimilar to At1g69040: ACR4 (ACT REPEAT 4) (HF=4e-1)
Module size 6 genes
NF 0.59
%ile 78.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.94Zm.12792.1.A1_atCA398944hypothetical protein LOC100272306-4e-1At1g69040ACR4 (ACT REPEAT 4)O.I.H.G.S.X.
0.6785.80.95Zm.9025.1.A1_atBM080048mitochondrial import inner membrane translocase subunit TIM14-7e-12At3g09700DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.6077.80.94Zm.2455.1.A1_atBM416746SET domain protein 110-5e+0At4g24420RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.5065.70.96Zm.2400.1.A1_atBG840741disease resistance response protein 206-7e-3At3g60270uclacyanin, putativeO.I.H.G.S.X.
0.3336.00.94Zm.13437.1.S1_atAF039304.1cpSecY-2e-36At2g18710SCY1 (SecY Homolog 1)O.I.H.G.S.X.
0.2928.10.94Zm.14435.1.S1_atAY109360.160S ribosomal protein L22-2-3e-35At3g0556060S ribosomal protein L22-2 (RPL22B)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.098.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.592.6GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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