Co-expression analysis

Gene ID Zm.12750.2.A1_x_at
Gene name
Homology with ArabidopsisSimilar to At2g21410: VHA-A2 (VACUOLAR PROTON ATPASE A2) (HF=5e-38)
Module size 11 genes
NF 0.35
%ile 35.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.00.99Zm.12750.2.A1_x_atCD446742--5e-38At2g21410VHA-A2 (VACUOLAR PROTON ATPASE A2)O.I.H.G.S.X.
0.4658.40.99Zm.10832.1.A1_atBQ619413--5e+0At4g08190Ras-related GTP-binding protein, putativeO.I.H.G.S.X.
0.4658.40.99Zm.13588.1.A1_atAY107800.1--1e+0At4g3467040S ribosomal protein S3A (RPS3aB)O.I.H.G.S.X.
0.4455.70.99Zm.361.1.A1_atAB060130.1response regulator 8-5e-3At3g16857ARR1 (ARABIDOPSIS RESPONSE REGULATOR 1)O.I.H.G.S.X.
0.4251.30.99Zm.7016.1.A1_atAY103859.1--3e-1At5g44610MAP18 (Microtubule-associated Protein 18)O.I.H.G.S.X.
0.3336.00.99Zm.13940.1.S1_atAI677337hypothetical protein LOC100193246-1e+0At4g0081060S acidic ribosomal protein P1 (RPP1B)O.I.H.G.S.X.
0.3336.00.99Zm.15242.1.A1_atBM340075--1e+1At3g16712unknown proteinO.I.H.G.S.X.
0.2828.10.99Zm.6275.1.S1_a_atAF540907.1benzoxazin6-7e-1At1g066402-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.
0.2318.60.99Zm.3610.1.A1_atAW065778hypothetical protein LOC100276901-2e+0At4g04360unknown proteinO.I.H.G.S.X.
0.2318.60.99Zm.8311.2.A1_a_atBM073622--4e+0At4g23090unknown proteinO.I.H.G.S.X.
0.2115.50.99Zm.1094.1.A1_atBM339500--2e-5At5g26210AL4 (ALFIN-LIKE 4)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.195.9GSM290555CCR mutant M1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)Link to GEO
3.695.2GSM290553WS1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)Link to GEO
2.993.8GSM290554WS2 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)Link to GEO
2.793.2GSM290556CCR mutant M2 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)Link to GEO
2.190.8GSM205365Mo17 13 DAP endosperm tissue biological replicate 1GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
2.190.8GSM206317Right pulvinus control total RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.090.2GSM205369Mo17 13 DAP endosperm tissue biological replicate 2GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
2.090.2GSM205373Mo17 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
1.888.9GSM205375Mo17xB73 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
1.888.9GSM202307B73xMo17 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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