| Gene ID | Zm.12634.3.A1_a_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At4g16830: nuclear RNA-binding protein (RGGA) (HF=4e+0) |
| Module size | 6 genes |
| NF | 0.59 |
| %ile | 78.8 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.59 | 76.1 | 0.96 | Zm.12634.3.A1_a_at | AI891366 | - | - | 4e+0 | At4g16830 | nuclear RNA-binding protein (RGGA) | O.I. | H.G. | S.X. | |
| 0.67 | 85.8 | 0.97 | Zm.1322.1.A1_at | AI737263 | hypothetical protein LOC100279212 | - | 5e-31 | At3g02760 | ATP binding / aminoacyl-tRNA ligase/ histidine-tRNA ligase/ nucleotide binding | O.I. | H.G. | S.X. | |
| 0.55 | 71.6 | 0.97 | Zm.4977.1.S1_at | AY109232.1 | - | - | 2e-1 | At1g58360 | AAP1 (AMINO ACID PERMEASE 1) | O.I. | H.G. | S.X. | |
| 0.53 | 69.1 | 0.97 | - | - | O.I. | H.G. | S.X. | ||||||
| 0.50 | 65.7 | 0.98 | Zm.2758.1.A1_at | AW067110 | - | - | 2e-6 | At2g25730 | unknown protein | O.I. | H.G. | S.X. | |
| 0.48 | 61.3 | 0.97 | Zm.16861.2.S1_at | AW498347 | L-ascorbate oxidase | - | 7e-4 | At1g55570 | sks12 (SKU5 Similar 12) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 5.8 | 97.2 | GSM253279 | ZM_8d_SG200_3inf_III | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 5.5 | 97.1 | GSM253278 | ZM_8d_SG200_3inf_II | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 4.5 | 96.3 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.5 | 96.3 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.3 | 96.1 | GSM320441 | protocol: mRNA - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.2 | 96.0 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.0 | 95.8 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.0 | 95.8 | GSM253277 | ZM_8d_SG200_3inf_I | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 3.8 | 95.5 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.7 | 95.4 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 99.2 | PtpAffx.222095.1.S1_s_at | At4g16830 | hypothetical protein | - | 1e-1 | At5g07880 | SNAP29 | O.I. | H.G. | S.X. | |
| 0.13 | 21.6 | PtpAffx.18595.2.A1_at | At4g16830 | - | - | 2e-21 | At2g39020 | GCN5-related N-acetyltransferase (GNAT) family protein | O.I. | H.G. | S.X. | |
| 0.02 | 3.6 | PtpAffx.209744.1.S1_at | At4g16830 | hypothetical protein | - | 4e-2 | At1g55890 | pentatricopeptide (PPR) repeat-containing protein | O.I. | H.G. | S.X. | |
| 0.01 | 2.2 | PtpAffx.20166.1.A1_at | At4g16830 | - | - | 2e+0 | At4g30270 | MERI5B (meristem-5) | O.I. | H.G. | S.X. | |
| 0.00 | 0.4 | PtpAffx.207689.1.S1_at | At4g16830 | hypothetical protein | - | 2e-15 | At2g39500 | unknown protein | O.I. | H.G. | S.X. | |
| 0.00 | 0.4 | PtpAffx.18295.3.A1_at | At4g16830 | hypothetical protein | - | 4e-14 | At5g14030 | translocon-associated protein beta (TRAPB) family protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Oryza_sativa |
| Triticum_aestivum |
| Vitis_vinifera |
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