| Gene ID | Zm.12634.3.A1_a_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At4g16830: nuclear RNA-binding protein (RGGA) (HF=4e+0) |
| Module size | 6 genes |
| NF | 0.59 |
| %ile | 78.8 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.59 | 76.1 | 0.96 | Zm.12634.3.A1_a_at | AI891366 | - | - | 4e+0 | At4g16830 | nuclear RNA-binding protein (RGGA) | O.I. | H.G. | S.X. | |
| 0.67 | 85.8 | 0.97 | Zm.1322.1.A1_at | AI737263 | hypothetical protein LOC100279212 | - | 5e-31 | At3g02760 | ATP binding / aminoacyl-tRNA ligase/ histidine-tRNA ligase/ nucleotide binding | O.I. | H.G. | S.X. | |
| 0.55 | 71.6 | 0.97 | Zm.4977.1.S1_at | AY109232.1 | - | - | 2e-1 | At1g58360 | AAP1 (AMINO ACID PERMEASE 1) | O.I. | H.G. | S.X. | |
| 0.53 | 69.1 | 0.97 | - | - | O.I. | H.G. | S.X. | ||||||
| 0.50 | 65.7 | 0.98 | Zm.2758.1.A1_at | AW067110 | - | - | 2e-6 | At2g25730 | unknown protein | O.I. | H.G. | S.X. | |
| 0.48 | 61.3 | 0.97 | Zm.16861.2.S1_at | AW498347 | L-ascorbate oxidase | - | 7e-4 | At1g55570 | sks12 (SKU5 Similar 12) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 5.8 | 97.2 | GSM253279 | ZM_8d_SG200_3inf_III | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 5.5 | 97.1 | GSM253278 | ZM_8d_SG200_3inf_II | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 4.5 | 96.3 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.5 | 96.3 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.3 | 96.1 | GSM320441 | protocol: mRNA - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.2 | 96.0 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.0 | 95.8 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.0 | 95.8 | GSM253277 | ZM_8d_SG200_3inf_I | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 3.8 | 95.5 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.7 | 95.4 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.61 | 81.2 | Os07g0575100 | At4g16830 | - | ARM repeat fold domain containing protein | 6e-65 | At5g19820 | emb2734 (embryo defective 2734) | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | Os02g0184000 | At4g16830 | - | Zn-finger, DHHC type domain containing protein | 1e-46 | At5g20350 | TIP1 (TIP GROWTH DEFECTIVE 1) | O.I. | H.G. | S.X. | |
| 0.40 | 51.1 | Os03g0310500 | At4g16830 | - | CAP protein family protein | 2e-14 | At4g16170 | unknown protein | O.I. | H.G. | S.X. | |
| 0.40 | 51.1 | Os01g0558900 | At4g16830 | - | Hypothetical protein | 8e-12 | At5g56730 | peptidase M16 family protein / insulinase family protein | O.I. | H.G. | S.X. | |
| 0.21 | 17.9 | Os02g0175500 | At4g16830 | - | Arabidopsis protein of unknown function DUF266family protein | 7e-11 | At4g25870 | unknown protein | O.I. | H.G. | S.X. | |
| 0.19 | 15.1 | Os01g0773600 | At4g16830 | - | Glycoside hydrolase, family 47 protein | 3e-44 | At5g43710 | glycoside hydrolase family 47 protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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