Co-expression analysis

Gene ID	Zm.12626.2.A1_a_at
Gene name	craniofacial development protein 1
Homology with Arabidopsis	Similar to At1g01640: speckle-type POZ protein-related (HF=3e-1)
Module size	6 genes
NF	0.35
%ile	36.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.1	0.94	Zm.12626.2.A1_a_at	BG841446	craniofacial development protein 1	-	3e-1	At1g01640	speckle-type POZ protein-related	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.94	Zm.15615.1.S1_at	CO533411	plant-specific domain TIGR01627 family protein	-	1e+1	At5g15840	CO (CONSTANS)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.94	Zm.17686.1.A1_at	CF632894	-	-	3e-1	At5g52270	vesicle transport protein-related	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.94	Zm.16207.1.S1_at	AY109575.1	-	-	6e-43	At1g23190	phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.94	Zm.8703.1.A1_at	BM337839	-	-	1e+0	At4g25330	unknown protein	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.94	Zm.12429.1.A1_at	CA403429	conserved protein	-	3e-9	At5g19300	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.3	98.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.1	98.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.9	98.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.7	98.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.5	98.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.3	98.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.1	98.5	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.1	98.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.9	98.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.9	95.7	GSM320470	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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