Co-expression analysis

Gene ID Zm.125.1.S1_at
Gene name nitrate reductase (NAD(P)H)
Homology with ArabidopsisSimilar to At5g24560: AtPP2-B12 (Phloem protein 2-B12) (HF=7e+0)
Module size 11 genes
NF 0.29
%ile 25.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4658.40.81Zm.125.1.S1_atX64446.1nitrate reductase (NAD(P)H)-7e+0At5g24560AtPP2-B12 (Phloem protein 2-B12)O.I.H.G.S.X.
0.3742.30.86Zm.829.2.S1_atCD433332Hypothetical protein LOC100193988-2e-49At2g02760ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2)O.I.H.G.S.X.
0.3233.40.90Zm.2424.1.A1_atBG841655--5e+0At5g52965unknown proteinO.I.H.G.S.X.
0.3029.80.92Zm.3980.1.A1_atBM382313hypothetical protein LOC100274012-4e+0At4g22740glycine-rich proteinO.I.H.G.S.X.
0.2724.60.86Zm.12042.1.A1_atBM416736--1e+0At3g58790GAUT15 (Galacturonosyltransferase 15)O.I.H.G.S.X.
0.2622.70.91Zm.5858.1.A1_atAI649924--7e+0At1g71130AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.2521.30.89Zm.5588.1.A1_atAW054109hypothetical protein LOC100216582-3e-2At3g09160RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.2216.90.91Zm.7667.1.A1_atCO527800hypothetical protein LOC100191689-1e-7At5g64670ribosomal protein L15 family proteinO.I.H.G.S.X.
0.2115.50.91Zm.14628.1.A1_atBM075532--8e+0At3g19790unknown proteinO.I.H.G.S.X.
0.1811.60.87Zm.5079.1.A1_atCF043421--1e+1At5g39645-O.I.H.G.S.X.
0.1811.60.92Zm.722.1.A1_atAW288498chalcone synthase-3e-8At5g13930TT4 (TRANSPARENT TESTA 4)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
26.399.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.599.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.299.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.599.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.098.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.798.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.496.2GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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