Co-expression analysis

Gene ID Zm.12391.1.S1_at
Gene name endochitinase PR4
Homology with ArabidopsisSimilar to At3g54420: ATEP3 (HF=1e-1)
Module size 18 genes
NF 0.47
%ile 58.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8194.30.96Zm.12391.1.S1_atCF349132endochitinase PR4-1e-1At3g54420ATEP3O.I.H.G.S.X.
0.7992.80.97Zm.4669.1.S1_atAI737897Growth-regulating factor 9-like-5e-5At3g52910AtGRF4 (GROWTH-REGULATING FACTOR 4)O.I.H.G.S.X.
0.6582.10.98Zm.3379.1.A1_atBM075631hypothetical protein LOC100272941-1e+0At3g59250F-box family proteinO.I.H.G.S.X.
0.6279.80.97Zm.10756.1.S1_atCD975109--2e+0At1g58460unknown proteinO.I.H.G.S.X.
0.6077.80.96Zm.7146.1.A1_atCF00389930S ribosomal protein S17 /// hypothetical protein LOC100276656-3e-20At1g79850RPS17 (RIBOSOMAL PROTEIN S17)O.I.H.G.S.X.
0.5571.60.97Zm.1076.1.S1_atAY103995.1photosystem II subunit29-3e-27At3g08940LHCB4.2 (light harvesting complex PSII)O.I.H.G.S.X.
0.4961.90.97Zm.19179.1.S1_atCO530465hypothetical protein LOC100217065 /// 4Fe-4S ferredoxin, iron-sulfur binding protein-3e+0At3g51690-O.I.H.G.S.X.
0.4759.90.97Zm.14352.3.S1_atCD448920--3e+0At3g43420unknown proteinO.I.H.G.S.X.
0.4658.40.98Zm.5723.1.A1_atBM079835fiber protein Fb2-9e-3At4g33740unknown proteinO.I.H.G.S.X.
0.4352.80.97Zm.3044.2.A1_atAI881563--8e-1At1g59835unknown proteinO.I.H.G.S.X.
0.4352.80.97Zm.15873.1.A1_atBM339859IDP1704 protein-8e-5At1g63180UGE3 (UDP-D-glucose/UDP-D-galactose 4-epimerase 3)O.I.H.G.S.X.
0.4352.80.98Zm.3044.2.S1_a_atAI881563--8e-1At1g59835unknown proteinO.I.H.G.S.X.
0.4149.70.98Zm.5141.1.A1_atCF628146--2e-60At1g69960PP2A (SERINE/THREONINE PROTEIN PHOSPHATASE 2A)O.I.H.G.S.X.
0.3844.20.98Zm.8581.1.A1_atBM267381hypothetical protein LOC100216584-4e-2At3g46030HTB11O.I.H.G.S.X.
0.3336.00.98Zm.6984.8.A1_a_atAI770763Hypothetical protein LOC100193571-4e+0At5g28615-O.I.H.G.S.X.
0.3029.80.98Zm.16537.1.S1_atAY103617.140S ribosomal protein SA-4e-70At1g72370P40O.I.H.G.S.X.
0.3029.80.98Zm.743.1.S1_atBG321150hypothetical protein LOC100275158-5e-2At5g65360histone H3O.I.H.G.S.X.
0.2828.10.98Zm.11150.1.A1_atCO518263hypothetical protein LOC100279642-2e+0At5g61110protein binding / zinc ion bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.598.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.196.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM205433B73 19 DAP endosperm tissue biological replicate 3GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAPLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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