Co-expression analysis

Gene ID Zm.12338.1.S1_at
Gene name hypothetical protein LOC100276807
Homology with ArabidopsisSimilar to At5g40451: unknown protein (HF=5e+0)
Module size 9 genes
NF 0.59
%ile 78.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.90.92Zm.12338.1.S1_atBQ744947hypothetical protein LOC100276807-5e+0At5g40451unknown proteinO.I.H.G.S.X.
0.6785.80.92Zm.6419.1.A1_atCF635415xyloglucan endotransglucosylase/hydrolase-3e-6At5g13870EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4)O.I.H.G.S.X.
0.6785.80.93Zm.4336.1.S1_atCA403908hypothetical protein LOC100274309-4e+0At5g38580-O.I.H.G.S.X.
0.6381.10.93Zm.6505.1.A1_atAI692111SAM domain family protein-2e-1At5g52220-O.I.H.G.S.X.
0.6381.10.93Zm.6503.1.A1_atCK370921--1e-1At1g04445zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.5469.80.93Zm.6381.1.A1_atCO534945hypothetical protein LOC100273528-2e+0At2g42610LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)O.I.H.G.S.X.
0.5065.70.94Zm.12612.1.A1_atBU050513--6e-1At1g23260MMZ1 (MMS ZWEI HOMOLOGUE 1)O.I.H.G.S.X.
0.4455.70.93Zm.5017.1.S1_atBM072931dynamin-related protein 1C-5e-46At1g14830ADL1C (ARABIDOPSIS DYNAMIN-LIKE PROTEIN 1C)O.I.H.G.S.X.
0.4048.50.93Zm.5612.1.A1_atAY106400.1L-galactose dehydrogenase-7e-10At4g33670L-galactose dehydrogenase (L-GalDH)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.898.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM205429B73xMo17 19 DAP endosperm tissue biological replicate 2GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAPLink to GEO
5.597.1GSM205423B73xMo17 19 DAP endosperm tissue biological replicate 1GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAPLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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