Co-expression analysis

Gene ID Zm.12309.1.S1_at
Gene name ABA-induced protein
Homology with ArabidopsisSimilar to At5g29560: calcium ion binding (HF=5e-1)
Module size 8 genes
NF 0.37
%ile 39.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6785.80.97Zm.12309.1.S1_atCA403435ABA-induced protein-5e-1At5g29560calcium ion bindingO.I.H.G.S.X.
0.5369.10.96ZmAffx.1193.1.A1_atBE025345--3e+0At3g13140hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.4658.40.96Zm.16741.1.S1_atAY108913.1--8e-7At5g19050unknown proteinO.I.H.G.S.X.
0.3641.30.98Zm.3080.1.A1_atBM382308IAA13 - auxin-responsive Aux/IAA family member-3e-15At3g23050IAA7 (INDOLE-3-ACETIC ACID 7)O.I.H.G.S.X.
0.3538.90.97Zm.1659.1.A1_atBG316738hypothetical protein LOC100194135-3e+0At1g79010NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (TYKY)O.I.H.G.S.X.
0.2724.60.97Zm.18115.1.A1_atCN845273ring domain containing protein-5e-1At2g23780zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2318.60.96Zm.484.1.A1_atAF136827.1elongation factor 1 alpha-0At1g07920elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.2115.50.98Zm.6941.1.A1_atCF638044--4e-1At3g46770transcriptional factor B3 family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.298.8GSM162264Mutant 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
13.598.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
11.598.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM162265Wild type 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
6.697.6GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
3.695.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.194.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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