Co-expression analysis

Gene ID	Zm.12300.1.A1_at
Gene name	ruBisCO large subunit-binding protein subunit alpha
Homology with Arabidopsis	Similar to At2g28000: CPN60A (CHAPERONIN-60ALPHA) (HF=1e-37)
Module size	6 genes
NF	0.60
%ile	80.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	89.9	1.00	Zm.12300.1.A1_at	CF626520	ruBisCO large subunit-binding protein subunit alpha	-	1e-37	At2g28000	CPN60A (CHAPERONIN-60ALPHA)	O.I.	H.G.	S.X.	Please select
0.67	85.8	1.00	ZmAffx.1103.1.A1_at	AW191100	-	-	1e+1	At5g43700	ATAUX2-11 (AUXIN INDUCIBLE 2-11)	O.I.	H.G.	S.X.	Please select
0.50	65.7	1.00	Zm.3169.5.S1_x_at	AI739763	minichromosome maintenance protein	-	1e-1	At5g44635	minichromosome maintenance family protein / MCM family protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	1.00	ZmAffx.108.1.S1_at	AI665554	Hypothetical protein LOC100191707	-	8e-1	At5g39640	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	55.7	1.00	Zm.4194.1.A1_at	AI861230	hypothetical protein LOC100276018	-	3e+0	At1g71180	6-phosphogluconate dehydrogenase NAD-binding domain-containing protein	O.I.	H.G.	S.X.	Please select
0.36	41.3	1.00	Zm.4853.1.S1_at	CD439703	-	-	2e-1	At2g45070	SEC61 BETA	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.8	95.5	GSM253270	ZM_4.5d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
3.2	94.5	GSM253281	ZM_8d_SG200_3Alu_II	GSE10023	Maize gene expression during infection with Ustilago maydis
3.2	94.5	GSM253268	ZM_4.5d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
2.9	93.8	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis
2.7	93.2	GSM162267	Mutant 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
2.5	92.6	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.4	92.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.4	92.2	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis
2.2	91.3	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.2	91.3	GSM320442	protocol: mRNA - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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