Co-expression analysis

Gene ID	Zm.12263.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g16110: unknown protein (HF=4e+0)
Module size	6 genes
NF	0.22
%ile	17.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	85.8	0.92	Zm.12263.1.S1_at	BQ528944	-	-	4e+0	At5g16110	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.93	Zm.1356.2.S1_a_at	CF014499	metallothionein-like protein type 2	-	7e-3	At3g09390	MT2A (METALLOTHIONEIN 2A)	O.I.	H.G.	S.X.	Please select
0.19	12.8	0.92	Zm.18060.1.A1_at	CK985812	-	-	2e+0	At4g07515	unknown protein	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.94	Zm.8514.1.A1_at	AY104758.1	PREG-like protein	-	5e+0	At5g35525	unknown protein	O.I.	H.G.	S.X.	Please select
0.15	8.6	0.93	Zm.11725.1.A1_at	BM380225	-	-	3e+0	At4g05430	-	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.93	Zm.7512.2.A1_a_at	AI691598	hypothetical protein LOC100276101	-	4e-1	At5g08590	SNRK2.1 (SNF1-RELATED PROTEIN KINASE 2.1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
22.0	99.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.6	99.3	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.1	99.2	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.6	99.2	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.7	99.1	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.5	99.1	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.9	99.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.7	99.1	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.2	99.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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