Co-expression analysis

Gene ID Zm.12225.1.A1_at
Gene name DIP1
Homology with ArabidopsisSimilar to At3g14340: unknown protein (HF=2e+0)
Module size 6 genes
NF 0.52
%ile 68.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.10.99Zm.12225.1.A1_atCA403034DIP1-2e+0At3g14340unknown proteinO.I.H.G.S.X.
0.8395.60.99Zm.12691.1.A1_atBU645208zinc finger C-x8-C-x5-C-x3-H type family protein-2e+0At4g16990RLM3 (RESISTANCE TO LEPTOSPHAERIA MACULANS 3)O.I.H.G.S.X.
0.8395.60.99Zm.1269.1.A1_atBM350862--5e+0At5g53980ATHB52 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 52)O.I.H.G.S.X.
0.8094.00.99Zm.12690.1.S1_atCA831966hypothetical protein LOC100191357-5e-23At4g12790ATP-binding family proteinO.I.H.G.S.X.
0.3233.40.99Zm.7127.1.A1_atBM266653nonspecific lipid-transfer protein-8e+0At5g53300UBC10 (ubiquitin-conjugating enzyme 10)O.I.H.G.S.X.
0.2318.60.99Zm.221.1.A1_atU28376.1calcium-dependent protein kinase-4e-25At3g20410CPK9 (calmodulin-domain protein kinase 9)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.797.2GSM258535Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 3GSE10243Profiling expression changes caused by a segmental aneuploid in maizeLink to GEO
3.895.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.194.3GSM258533Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 2GSE10243Profiling expression changes caused by a segmental aneuploid in maizeLink to GEO
3.094.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.993.8GSM258537Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 4GSE10243Profiling expression changes caused by a segmental aneuploid in maizeLink to GEO
2.993.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.692.9GSM206312Upper pulvinus 2 min total RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.692.9GSM258536DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 3GSE10243Profiling expression changes caused by a segmental aneuploid in maizeLink to GEO
2.692.9GSM258532DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 1GSE10243Profiling expression changes caused by a segmental aneuploid in maizeLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.3753.1.S1_at, orthologous to the query gene, Zm.12225.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7493.8PtpAffx.3753.1.S1_atAt3g14340hypothetical protein-1e-18At3g56680nucleic acid bindingO.I.H.G.S.X.
0.5380.5PtpAffx.17219.1.A1_atAt3g14340--5e+0At5g47650ATNUDT2 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 2)O.I.H.G.S.X.
0.4067.0PtpAffx.8857.2.A1_a_atAt3g14340--8e-9At1g33230-O.I.H.G.S.X.
0.3661.6PtpAffx.5360.1.S1_atAt3g14340hypothetical protein-3e-18At3g26420ATRZ-1AO.I.H.G.S.X.
0.3559.7Ptp.2643.1.S1_s_atAt3g14340hypothetical protein-3e-60At3g13460ECT2O.I.H.G.S.X.
0.3357.5PtpAffx.41318.1.S1_atAt3g14340hypothetical protein-3e-53At5g65780ATBCAT-5O.I.H.G.S.X.
0.3357.5PtpAffx.8015.1.S1_atAt3g14340hypothetical protein-5e-16At3g53230cell division cycle protein 48, putative / CDC48, putativeO.I.H.G.S.X.
0.2950.5Ptp.7216.1.S1_a_atAt3g14340hypothetical protein-2e+0At1g14300bindingO.I.H.G.S.X.
0.2850.5PtpAffx.1988.1.S1_atAt3g14340global transcription factor group-8e-75At1g55520TBP2 (TATA BINDING PROTEIN 2)O.I.H.G.S.X.
0.2747.1Ptp.2585.1.S1_atAt3g14340hypothetical protein-4e-15At5g05100nucleic acid bindingO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera



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