Co-expression analysis

Gene ID	Zm.12202.1.A1_at
Gene name	Galactinol synthase 1
Homology with Arabidopsis	Similar to At1g09350: AtGolS3 (Arabidopsis thaliana galactinol synthase 3) (HF=3e-5)
Module size	8 genes
NF	0.55
%ile	72.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	69.1	0.96	Zm.12202.1.A1_at	BG549493	Galactinol synthase 1	-	3e-5	At1g09350	AtGolS3 (Arabidopsis thaliana galactinol synthase 3)	O.I.	H.G.	S.X.	Please select
0.71	88.2	0.98	Zm.1519.1.S1_at	AF033263.1	blue-light receptor phototropin 1	-	5e-16	At3g45780	PHOT1 (PHOTOTROPIN 1)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.97	Zm.804.1.A1_at	CF627442	chaperone protein dnaJ	-	1e-5	At5g48030	GFA2 (GAMETOPHYTIC FACTOR 2)	O.I.	H.G.	S.X.	Please select
0.63	81.1	0.97	Zm.494.2.S1_at	BE056113	Prohibitin1	-	3e+0	At5g17510	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.8138.1.A1_at	BM336608	tubby protein	-	1e-3	At1g25280	AtTLP10 (TUBBY LIKE PROTEIN 10)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.98	Zm.15194.1.A1_at	BM334114	-	-	4e+0	At1g16025	unknown protein	O.I.	H.G.	S.X.	Please select
0.41	49.7	0.97	Zm.18045.1.A1_at	BM080270	-	-	8e-4	At1g22180	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.98	Zm.17862.1.A1_at	CO520595	serine/threonine-protein kinase WNK4	-	5e+0	At4g09440	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.8	98.3	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.1	98.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.5	97.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.2	97.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.8	97.2	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4	96.2	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.0	95.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.5	95.1	GSM253278	ZM_8d_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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