Co-expression analysis

Gene ID Zm.12186.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g06160: ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59) (HF=5e-1)
Module size 16 genes
NF 0.48
%ile 60.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5267.30.96Zm.12186.1.A1_atBM382225--5e-1At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)O.I.H.G.S.X.
0.5976.10.97Zm.4813.1.S1_atCD977978--5e-1At1g35537-O.I.H.G.S.X.
0.5875.10.98Zm.6096.1.A1_atCF636033hypothetical protein LOC100273833-6e-1At4g39170SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeO.I.H.G.S.X.
0.5875.10.98Zm.2806.1.A1_a_atAW067337--6e-1At2g41660MIZ1 (mizu-kussei 1)O.I.H.G.S.X.
0.5571.60.97Zm.5143.1.A1_atAY107731.1hypothetical protein LOC100276623-1e-1At1g74730unknown proteinO.I.H.G.S.X.
0.5469.80.97Zm.15694.1.A1_atCD441036--6e-3At4g22600unknown proteinO.I.H.G.S.X.
0.5166.40.97Zm.5106.1.A1_atAI600864hypothetical protein LOC100273412-1e-20At4g22330ATCES1O.I.H.G.S.X.
0.5166.40.98Zm.14497.9.S1_atBM382119--2e-15At5g59910HTB4O.I.H.G.S.X.
0.5065.70.97Zm.18033.1.A1_atBM080835--1e+0At1g11240unknown proteinO.I.H.G.S.X.
0.5065.70.98Zm.796.1.A1_a_atCK370719--3e-9At5g53140protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.4861.30.97Zm.13351.2.A1_atAY110216.1Protein kinase-2e-13At5g55910D6PK (D6 PROTEIN KINASE)O.I.H.G.S.X.
0.4455.70.98Zm.2463.1.S1_a_atAY108135.1hypothetical protein LOC100193981 /// hypothetical protein LOC100275076 /// hypothetical protein LOC100278476-6e-1At5g64110peroxidase, putativeO.I.H.G.S.X.
0.4048.50.97Zm.384.1.A1_atAF001635.1physical impedance induced protein2-6e+0At5g03100F-box family proteinO.I.H.G.S.X.
0.3945.60.98Zm.19266.1.A1_atCO521373--2e+1At5g20570RBX1 (RING-BOX 1)O.I.H.G.S.X.
0.3844.20.98Zm.1079.4.S1_atAY109373.1--2e-2At5g14740CA2 (CARBONIC ANHYDRASE 2)O.I.H.G.S.X.
0.2828.10.97Zm.3353.1.A1_atAI947755toc64-4e-1At3g09120unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.497.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.596.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.496.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.995.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.695.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.494.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.692.9GSM205373Mo17 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
2.592.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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