Co-expression analysis

Gene ID Zm.12177.1.A1_at
Gene name hypothetical protein LOC100193797
Homology with ArabidopsisSimilar to At2g05752: unknown protein (HF=3e-1)
Module size 6 genes
NF 0.28
%ile 24.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4455.70.86Zm.12177.1.A1_atBM380114hypothetical protein LOC100193797-3e-1At2g05752unknown proteinO.I.H.G.S.X.
0.5571.60.87Zm.17272.1.S1_atCK371238--8e-6At2g41190amino acid transporter family proteinO.I.H.G.S.X.
0.3538.90.87Zm.8348.1.A1_atBM073795Hypothetical protein LOC100193915-3e-1At3g20750zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.3029.80.88Zm.8037.1.A1_atBM073083--1e+0At5g58580ATL63 (ARABIDOPSIS TÓO.I.H.G.S.X.
0.169.40.88ZmAffx.1022.1.S1_atAI881590--3e+0At5g46800BOU (A BOUT DE SOUFFLE)O.I.H.G.S.X.
0.104.60.89Zm.17615.1.A1_atCK347383protein binding protein-2e+0At2g20620unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.899.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320471protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, Gma.17383.1.S1_at, orthologous to the query gene, Zm.12177.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9499.2Gma.17383.1.S1_atAt2g05752--1e+0At1g15270-O.I.H.G.S.X.
0.5979.5Gma.15513.3.S1_atAt2g05752--1e+0At5g64020unknown proteinO.I.H.G.S.X.
0.5678.2Gma.3396.1.A1_atAt2g05752--6e-3At5g09250KIWIO.I.H.G.S.X.
0.5374.2Gma.6598.1.S1_atAt2g05752--1e+0At3g18530bindingO.I.H.G.S.X.
0.5374.2GmaAffx.22113.1.S1_atAt2g05752--2e-1At3g60420-O.I.H.G.S.X.
0.4867.7GmaAffx.1854.1.A1_atAt2g05752--8e-1At3g17190unknown proteinO.I.H.G.S.X.
0.4665.5Gma.6467.2.A1_atAt2g05752MSI1-2e-11At5g58230MSI1 (MULTICOPY SUPRESSOR OF IRA1)O.I.H.G.S.X.
0.4665.5GmaAffx.17934.1.A1_atAt2g05752--4e-13At1g53500MUM4 (MUCILAGE-MODIFIED 4)O.I.H.G.S.X.
0.4665.5GmaAffx.11371.1.S1_atAt2g05752--3e+0At4g39040RNA bindingO.I.H.G.S.X.
0.4665.5Gma.5937.1.S1_atAt2g05752--1e+0At3g12710methyladenine glycosylase family proteinO.I.H.G.S.X.
0.4563.9Gma.13207.1.S1_atAt2g05752--7e-8At1g28395unknown proteinO.I.H.G.S.X.
0.4463.3GmaAffx.28382.1.S1_atAt2g05752--7e+0At5g66970GTP bindingO.I.H.G.S.X.
0.4158.1GmaAffx.75671.1.A1_atAt2g05752--3e+0At5g14400CYP724A1O.I.H.G.S.X.
0.3954.5Gma.15513.3.S1_x_atAt2g05752--1e+0At5g64020unknown proteinO.I.H.G.S.X.
0.3853.3Gma.12359.1.S1_atAt2g05752--4e+0At5g66370unknown proteinO.I.H.G.S.X.
0.3853.3Gma.15988.1.S1_atAt2g05752--8e-14At2g23930SNRNP-G (PROBABLE SMALL NUCLEAR RIBONUCLEOPROTEIN G)O.I.H.G.S.X.
0.3548.6GmaAffx.4993.1.S1_atAt2g05752--2e+0At5g25030ATP binding / nucleotide binding / phenylalanine-tRNA ligaseO.I.H.G.S.X.
0.3548.6Gma.3641.1.S1_atAt2g05752--1e+0At2g18510emb2444 (embryo defective 2444)O.I.H.G.S.X.
0.3243.7Gma.12843.1.A1_atAt2g05752--2e-11At5g17510unknown proteinO.I.H.G.S.X.
0.3243.7Gma.4542.1.S1_atAt2g05752--3e+0At1g47490ATRBP47C (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47C)O.I.H.G.S.X.
0.3142.2GmaAffx.47099.1.A1_atAt2g05752--3e-1At2g19820LBD9 (LOB DOMAIN-CONTAINING PROTEIN 9)O.I.H.G.S.X.
0.3040.4GmaAffx.68418.1.S1_s_atAt2g05752--4e-1At5g51870AGL71 (AGAMOUS-LIKE 71)O.I.H.G.S.X.
0.2532.6GmaAffx.4173.1.S1_atAt2g05752--2e-15At1g76510ARID/BRIGHT DNA-binding domain-containing proteinO.I.H.G.S.X.
0.2532.6GmaAffx.73770.1.S1_atAt2g05752--8e-1At3g28455CLE25 (CLAVATA3/ESR-RELATED 25)O.I.H.G.S.X.
0.2329.9Gma.15509.2.A1_atAt2g05752--7e-1At4g09012-O.I.H.G.S.X.
0.2126.6Gma.15705.1.S1_atAt2g05752--2e-19At1g18450ATARP4O.I.H.G.S.X.
0.1316.3Gma.12944.1.A1_atAt2g05752--3e+0At5g50665unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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