Co-expression analysis

Gene ID Zm.12137.1.S1_at
Gene name thaumatin-like protein 1
Homology with ArabidopsisSimilar to At4g36010: pathogenesis-related thaumatin family protein (HF=2e-1)
Module size 16 genes
NF 0.84
%ile 98.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6481.70.94Zm.12137.1.S1_atCO524051thaumatin-like protein 1-2e-1At4g36010pathogenesis-related thaumatin family proteinO.I.H.G.S.X.
0.9097.00.97Zm.16313.2.S1_x_atBM073358hypothetical protein LOC100272662-4e+0At5g23320ATSTE14A (ARABIDOPSIS HOMOLOG OF YEAST STE14 A)O.I.H.G.S.X.
0.9097.00.97Zm.16340.1.A1_atCA402857DNA binding protein-1e-2At2g45430DNA-binding protein-relatedO.I.H.G.S.X.
0.8896.70.96Zm.14572.1.A1_atCB179459--4e+0At1g23570unknown proteinO.I.H.G.S.X.
0.8796.40.97Zm.16339.1.S1_atAY107020.1calmodulin-binding protein MPCBP-5e-8At2g43040NPG1 (no pollen germination 1)O.I.H.G.S.X.
0.8796.40.97Zm.14573.1.S1_atCO527252glucan endo-1,3-beta-glucosidase 7-9e-1At3g46570glycosyl hydrolase family 17 proteinO.I.H.G.S.X.
0.8796.40.97Zm.12138.1.S1_atCO517967regulator of ribonuclease activity A-1e-4At5g16450dimethylmenaquinone methyltransferase family proteinO.I.H.G.S.X.
0.8595.90.95Zm.15977.1.S1_atAY108613.1hypothetical protein LOC100274845 /// hypothetical protein LOC100278086-5e+0At5g19050unknown proteinO.I.H.G.S.X.
0.8595.90.96Zm.6762.1.A1_atAI396242hypothetical protein LOC100279105-2e+0At5g38650proteasome maturation factor UMP1 family proteinO.I.H.G.S.X.
0.8495.80.96Zm.3668.1.A1_atAI649862--1e-10At1g54450calcium-binding EF-hand family proteinO.I.H.G.S.X.
0.8395.60.96Zm.14518.1.S1_atCD434065pyruvate decarboxylase-6e-28At5g54960PDC2 (pyruvate decarboxylase-2)O.I.H.G.S.X.
0.8194.30.97Zm.14574.1.A1_atCO530137--1e+0At4g11700unknown proteinO.I.H.G.S.X.
0.8194.30.97Zm.676.1.S1_a_atAF288075.1diphosphonucleotide phosphatase1-8e-4At5g63980SAL1O.I.H.G.S.X.
0.8094.00.96Zm.6757.1.S1_atCF636648GAST1 protein-2e-3At5g15230GASA4 (GAST1 PROTEIN HOMOLOG 4)O.I.H.G.S.X.
0.7892.50.96Zm.1458.1.S1_atBM418233hypothetical protein LOC100275716-1e+0At5g59610DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.6785.80.97Zm.13489.1.S1_atAY108817.1hypothetical protein LOC100275030-4e+0At2g43930protein kinase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.796.5GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
4.195.9GSM202304B73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
3.995.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.995.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.695.2GSM202292B73 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
3.595.1GSM202299Mo17xB73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
3.494.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM202297Mo17 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
3.394.7GSM202306Mo17xB73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
3.394.7GSM202302B73xMo17 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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