Co-expression analysis

Gene ID Zm.12136.1.A1_at
Gene name hypothetical protein LOC100276353
Homology with ArabidopsisSimilar to At2g28790: osmotin-like protein, putative (HF=5e-1)
Module size 20 genes
NF 0.49
%ile 62.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6381.10.88Zm.12136.1.A1_atAY109005.1hypothetical protein LOC100276353-5e-1At2g28790osmotin-like protein, putativeO.I.H.G.S.X.
0.6886.10.93Zm.6108.2.S1_atCA399319--5e-37At1g15290bindingO.I.H.G.S.X.
0.6381.10.92Zm.6038.2.A1_atAY105962.1--5e-1At5g56170-O.I.H.G.S.X.
0.6381.10.93Zm.2532.1.A1_atCF624878--1e+0At5g21960AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.5875.10.92Zm.2307.1.S1_atAY104400.1hypothetical protein LOC100279946-1e-17At4g26100CK1 (CASEIN KINASE 1)O.I.H.G.S.X.
0.5674.40.92Zm.13205.3.A1_atAI670579--6e-2At1g04645self-incompatibility protein-relatedO.I.H.G.S.X.
0.5369.10.92Zm.4301.1.A1_atAW066833hypothetical protein LOC100274567-2e+0At1g44750ATPUP11O.I.H.G.S.X.
0.5166.40.93Zm.7012.4.S1_x_atM95064.1Ribosomal protein S8-5e-12At5g5924040S ribosomal protein S8 (RPS8B)O.I.H.G.S.X.
0.5166.40.93Zm.1837.1.S1_atCF014756cp protein-1e-2At5g01610unknown proteinO.I.H.G.S.X.
0.5166.40.92Zm.15680.1.A1_atCA405039hypothetical protein LOC100277476-7e+0At3g43153cAMP-dependent protein kinase inhibitor-relatedO.I.H.G.S.X.
0.4961.90.93Zm.7000.1.A1_atCK827521hypothetical protein LOC100275012 /// hypothetical protein LOC100276117 /// hypothetical protein LOC100277141 /// ustilago maydis induced11-5e+0At2g42940DNA-binding family proteinO.I.H.G.S.X.
0.4759.90.92Zm.13505.1.A1_atAY108638.1chemocyanin-2e-2At1g04778unknown proteinO.I.H.G.S.X.
0.4759.90.91Zm.12879.1.S1_atAY105591.1salt-inducible protein kinase-5e-26At2g35050protein kinase family proteinO.I.H.G.S.X.
0.4658.40.93Zm.3221.1.S1_atCF035537--5e-39At5g45140NRPC2O.I.H.G.S.X.
0.4149.70.92Zm.13506.1.S1_atAY108635.1seed maturation protein-6e+0At5g58970ATUCP2 (UNCOUPLING PROTEIN 2)O.I.H.G.S.X.
0.4149.70.92Zm.5092.1.S1_atAI600799hypothetical protein LOC100192838-2e-6At5g11450oxygen-evolving complex-relatedO.I.H.G.S.X.
0.4149.70.94Zm.6822.2.S1_a_atCO518852receptor expression-enhancing protein 3-3e-2At5g42560abscisic acid-responsive HVA22 family proteinO.I.H.G.S.X.
0.3945.60.92Zm.3990.1.S1_atCF244104--5e-4At5g49830-O.I.H.G.S.X.
0.3742.30.91Zm.18503.1.A1_atCO518080--2e+1At3g12145FLR1O.I.H.G.S.X.
0.3641.30.87Zm.3519.1.A1_atAW053043--2e-1At2g20613unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.598.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.498.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.596.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.695.2GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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