| Gene ID | Zm.12132.3.S1_a_at |
| Gene name | hypothetical protein LOC100192680 |
| Homology with Arabidopsis | Similar to At5g03240: UBQ3 (POLYUBIQUITIN 3) (HF=4e-50) |
| Module size | 6 genes |
| NF | 0.66 |
| %ile | 88.0 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 99.0 | 0.98 | Zm.12132.3.S1_a_at | AI461523 | hypothetical protein LOC100192680 | - | 4e-50 | At5g03240 | UBQ3 (POLYUBIQUITIN 3) | O.I. | H.G. | S.X. | |
| 0.73 | 89.9 | 0.98 | Zm.4099.2.A1_s_at | AI770849 | hypothetical protein LOC100191159 | - | 8e-1 | At2g38870 | protease inhibitor, putative | O.I. | H.G. | S.X. | |
| 0.67 | 85.8 | 0.98 | Zm.18903.1.A1_at | CO530915 | - | - | 7e-2 | At5g07400 | forkhead-associated domain-containing protein / FHA domain-containing protein | O.I. | H.G. | S.X. | |
| 0.56 | 74.4 | 0.97 | ZmAffx.1074.1.S1_at | AI947680 | - | - | 1e+1 | At2g42210 | mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein | O.I. | H.G. | S.X. | |
| 0.53 | 69.1 | 0.98 | Zm.6418.1.S1_at | AY108322.1 | hypothetical protein LOC100216693 | - | 2e-1 | At3g44580 | unknown protein | O.I. | H.G. | S.X. | |
| 0.48 | 61.3 | 0.98 | ZmAffx.1097.1.S1_at | AW120085 | - | - | 1e+1 | At5g25770 | unknown protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 9.2 | 98.2 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.4 | 98.1 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.7 | 97.6 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.7 | 97.2 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.8 | 96.6 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.7 | 96.5 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.4 | 96.2 | GSM205367 | Mo17xB73 13 DAP endosperm tissue biological replicate 1 | GSE8275 | Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP | |
| 3.9 | 95.7 | GSM205365 | Mo17 13 DAP endosperm tissue biological replicate 1 | GSE8275 | Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP | |
| 2.9 | 93.8 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.7 | 93.2 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.71 | 87.8 | Gma.2534.3.S1_x_at | At5g03240 | - | - | 2e-85 | At4g05050 | UBQ11 (UBIQUITIN 11) | O.I. | H.G. | S.X. | |
| 0.67 | 86.1 | Gma.2534.7.S1_x_at | At5g03240 | - | - | 2e-30 | At4g02890 | UBQ14 | O.I. | H.G. | S.X. | |
| 0.38 | 53.3 | GmaAffx.93644.1.S1_x_at | At5g03240 | Ubiquitin | - | 7e-139 | At4g05320 | UBQ10 (POLYUBIQUITIN 10) | O.I. | H.G. | S.X. | |
| 0.36 | 50.8 | Gma.2011.1.S1_s_at | At5g03240 | - | - | 4e-5 | At4g25570 | ACYB-2 | O.I. | H.G. | S.X. | |
| 0.24 | 30.9 | GmaAffx.93393.1.S1_s_at | At5g03240 | ascorbate peroxidase 1, cytosolic /// L-ascorbate peroxidase 2 | - | 6e-22 | At1g07890 | APX1 (ascorbate peroxidase 1) | O.I. | H.G. | S.X. | |
| 0.17 | 21.2 | Gma.5244.3.S1_a_at | At5g03240 | - | - | 1e-32 | At2g32080 | PUR ALPHA-1 | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Hordeum_vulgare |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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