Co-expression analysis

Gene ID Zm.12080.1.A1_at
Gene name protein kinase APK1A
Homology with ArabidopsisSimilar to At2g28930: APK1B (HF=1e-18)
Module size 8 genes
NF 0.02
%ile 0.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8896.70.83Zm.12080.1.A1_atBM348988protein kinase APK1A-1e-18At2g28930APK1BO.I.H.G.S.X.
0.1811.60.90Zm.5548.3.A1_atBG837445hypothetical protein LOC100193890-4e-10At3g10740ASD1 (ALPHA-L-ARABINOFURANOSIDASE 1)O.I.H.G.S.X.
0.169.40.83Zm.7617.1.S1_atAB127981.1minE protein-1e-7At1g69390ATMINE1 (Arabidopsis homologue of bacterial MinE 1)O.I.H.G.S.X.
0.083.40.85Zm.9371.2.S1_a_atCF631830hypothetical protein LOC100275410-5e-1At1g25420unknown proteinO.I.H.G.S.X.
0.031.10.87Zm.2736.1.S1_atCD441565hypothetical protein LOC100193519-8e-38At2g05990MOD1 (MOSAIC DEATH 1)O.I.H.G.S.X.
0.010.30.91Zm.14502.1.S1_atCO531791co-chaperone protein SBA1-6e-4At4g02450glycine-rich proteinO.I.H.G.S.X.
0.010.30.90Zm.10931.1.A1_atAW091179hypothetical protein LOC100193417-3e-2At4g15080zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.010.30.85Zm.4904.1.S1_atAI621949arsenical pump-driving ATPase-3e-15At3g10350anion-transporting ATPase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.598.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.198.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.997.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.194.3GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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