Co-expression analysis

Gene ID Zm.1207.1.A1_at
Gene name growth-regulating factor 11-like
Homology with ArabidopsisSimilar to At5g15948: CPuORF10 (Conserved peptide upstream open reading frame 10) (HF=6e+0)
Module size 8 genes
NF 0.71
%ile 92.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8696.30.95Zm.1207.1.A1_atCO525598growth-regulating factor 11-like-6e+0At5g15948CPuORF10 (Conserved peptide upstream open reading frame 10)O.I.H.G.S.X.
0.8294.60.92Zm.6357.1.S1_atAY103601.1catalase1-8e-85At4g35090CAT2 (CATALASE 2)O.I.H.G.S.X.
0.8094.00.93ZmAffx.123.1.S1_atAI665878--8e-1At5g1520040S ribosomal protein S9 (RPS9B)O.I.H.G.S.X.
0.7892.50.92Zm.6351.1.S1_atAY105055.1hypothetical protein LOC100277708-5e-1At5g57685AtGDU3 (Arabidopsis thaliana GLUTAMINE DUMPER 3)O.I.H.G.S.X.
0.6785.80.94ZmAffx.1108.1.A1_atAW216343hypothetical protein LOC100191835-3e+0At4g12810F-box family proteinO.I.H.G.S.X.
0.5976.10.93Zm.5897.1.A1_atCA404128hypothetical protein LOC100193663-9e-38At3g47520MDH (MALATE DEHYDROGENASE)O.I.H.G.S.X.
0.5674.40.92ZmAffx.997.1.S1_atAI857164--3e+0At5g25990unknown proteinO.I.H.G.S.X.
0.4658.40.93Zm.15578.1.A1_atCD448284--8e+0At5g61310cytochrome c oxidase subunit Vc, putative / COX5C, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.999.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.598.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage