Co-expression analysis

Gene ID	Zm.12065.1.S1_at
Gene name	hypothetical protein LOC100275823
Homology with Arabidopsis	Similar to At5g52605: - (HF=5e-1)
Module size	17 genes
NF	0.36
%ile	38.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.82	94.6	0.96	Zm.12065.1.S1_at	CD219268	hypothetical protein LOC100275823	-	5e-1	At5g52605	-	O.I.	H.G.	S.X.	Please select
0.64	81.7	0.98	Zm.18885.1.A1_at	CO530040	hypothetical protein LOC100276818	-	3e+0	At5g28780	unknown protein	O.I.	H.G.	S.X.	Please select
0.64	81.7	0.97	Zm.17331.1.A1_at	CF631030	-	-	1e-3	At5g51640	YLS7	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.2264.1.A1_at	CF052773	-	-	5e+0	At5g45550	mob1/phocein family protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.98	Zm.16056.1.S1_at	CD994891	hypothetical protein LOC100279380	-	1e-3	At3g11120	60S ribosomal protein L41 (RPL41E)	O.I.	H.G.	S.X.	Please select
0.47	59.9	0.97	Zm.8996.1.A1_at	AY109834.1	-	-	5e-2	At5g38110	ASF1B (ANTI- SILENCING FUNCTION 1B)	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.98	Zm.3996.1.S1_at	CD436900	hypothetical protein LOC100274383	-	2e-11	At2g39770	CYT1 (CYTOKINESIS DEFECTIVE 1)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.96	Zm.6474.2.S1_a_at	CA402315	dephospho-CoA kinase	-	2e+0	At5g03980	GDSL-motif lipase/hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.97	Zm.5851.8.S1_a_at	X85334.1	ZEM3	-	1e-7	At4g18960	AG (AGAMOUS)	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.97	Zm.10393.1.S1_at	AI676981	-	-	2e+0	At5g11425	unknown protein	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.98	Zm.10112.1.A1_at	BM268000	-	-	1e+0	At5g23810	AAP7	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.97	Zm.18338.1.A1_at	BM074037	hypothetical protein LOC100193344	-	4e+0	At2g27410	unknown protein	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.98	Zm.13679.1.A1_at	AW424469	chemocyanin	-	9e-5	At1g72230	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.24	19.8	0.98	Zm.11992.1.A1_at	BM382475	-	-	3e+0	At5g41614	unknown protein	O.I.	H.G.	S.X.	Please select
0.24	19.8	0.97	Zm.12930.1.S1_at	CA403471	hypothetical protein LOC100191377	-	3e-3	At4g31790	diphthine synthase, putative (DPH5)	O.I.	H.G.	S.X.	Please select
0.22	16.9	0.97	Zm.2147.1.A1_a_at	BM380613	glycine-rich cell wall structural protein	-	4e-1	At4g01995	unknown protein	O.I.	H.G.	S.X.	Please select
0.19	12.8	0.98	Zm.14476.2.A1_at	AY109949.1	Protein disulfide isomerase	-	1e-5	At3g54960	ATPDIL1-3 (PDI-LIKE 1-3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
17.1	99.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.5	99.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.3	98.9	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.6	98.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.4	98.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.1	98.6	GSM162264	Mutant 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
11.8	98.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.9	97.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4	97.5	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.2	97.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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