Co-expression analysis

Gene ID Zm.12050.1.A1_at
Gene name early flowering 4
Homology with ArabidopsisSimilar to At5g16030: unknown protein (HF=1e+0)
Module size 13 genes
NF 0.39
%ile 44.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6179.50.85Zm.12050.1.A1_atBM416823early flowering 4-1e+0At5g16030unknown proteinO.I.H.G.S.X.
0.6179.50.90Zm.3892.5.A1_atBM07963460S ribosomal protein L28-6e-7At2g1973060S ribosomal protein L28 (RPL28A)O.I.H.G.S.X.
0.5065.70.91Zm.14068.1.S1_atAI920492vacuolar protein-sorting protein 45-2e-23At1g77140VPS45 (VACUOLAR PROTEIN SORTING 45)O.I.H.G.S.X.
0.4658.40.92Zm.1829.1.S1_atAY103809.1--3e+0At5g17710EMB1241 (embryo defective 1241)O.I.H.G.S.X.
0.4251.30.92ZmAffx.521.1.A1_atAI711634hypothetical protein LOC100193955-3e+0At5g27880zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.3844.20.90Zm.18531.1.A1_atBE575145hypothetical protein LOC100192889-2e+0At4g21280oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ)O.I.H.G.S.X.
0.3437.20.91Zm.5253.1.S1_atBM08061960S ribosomal protein L34-5e-19At3g2890060S ribosomal protein L34 (RPL34C)O.I.H.G.S.X.
0.3336.00.92Zm.4084.1.A1_atCK145425CONSTANS interacting protein 6-8e-1At5g28800unknown proteinO.I.H.G.S.X.
0.3131.60.92Zm.10798.1.A1_atCF003582Hypothetical protein LOC100191405-1e-2At1g26930kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.3029.80.89Zm.4682.1.S1_atAI737946acyl-desaturase-1e-1At5g16230acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeO.I.H.G.S.X.
0.3029.80.89Zm.3464.1.A1_atBM3487396-phosphogluconolactonase-2e-4At5g24400emb2024 (embryo defective 2024)O.I.H.G.S.X.
0.2521.30.92ZmAffx.706.1.A1_atAI738209--8e-1At1g23590unknown proteinO.I.H.G.S.X.
0.2216.90.92Zm.18561.1.A1_atCO517421hypothetical protein LOC100193602-1e-1At5g04660CYP77A4O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.798.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.398.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.094.0GSM375791Deep-sowing 10d treatment GA3, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing conditionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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