Co-expression analysis

Gene ID Zm.12021.1.A1_at
Gene name hypothetical protein LOC100273474
Homology with ArabidopsisSimilar to At5g10140: FLC (FLOWERING LOCUS C) (HF=4e+0)
Module size 6 genes
NF 0.34
%ile 33.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4658.40.95Zm.12021.1.A1_atBM382722hypothetical protein LOC100273474-4e+0At5g10140FLC (FLOWERING LOCUS C)O.I.H.G.S.X.
0.4658.40.96Zm.5565.1.S1_atD45402.1cysteine protease1-9e-11At4g39090RD19 (RESPONSIVE TO DEHYDRATION 19)O.I.H.G.S.X.
0.3538.90.97Zm.9236.1.A1_atBM339258--8e-2At3g01860unknown proteinO.I.H.G.S.X.
0.3131.60.96Zm.14307.1.S1_atBQ486034adenylate kinase-2e-1At2g39270adenylate kinase family proteinO.I.H.G.S.X.
0.2622.70.96Zm.5362.1.A1_atAW498436hypothetical protein LOC100193109-1e-1At1g79860ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12)O.I.H.G.S.X.
0.2521.30.96Zm.6142.1.A1_atAY105151.1annexin p33-2e-1At5g10220ANN6 (ANNEXIN ARABIDOPSIS 6)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.997.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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