Co-expression analysis

Gene ID Zm.1200.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g06630: proline-rich extensin-like family protein (HF=9e-1)
Module size 7 genes
NF 0.37
%ile 39.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6381.10.97Zm.1200.1.S1_atAY105762.1--9e-1At5g06630proline-rich extensin-like family proteinO.I.H.G.S.X.
0.5065.70.97Zm.2175.1.S1_atAW288761hypothetical protein LOC100278437-7e-1At2g35470unknown proteinO.I.H.G.S.X.
0.4759.90.97Zm.15825.1.S1_atCA403397glucan endo-1,3-beta-glucosidase A6-2e-2At4g17500ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)O.I.H.G.S.X.
0.4455.70.97Zm.18378.1.A1_atCO521100--2e+0At1g61520LHCA3O.I.H.G.S.X.
0.3029.80.98Zm.19120.1.A1_atCO523709hypothetical protein LOC100272621-4e-7At3g20810transcription factor jumonji (jmjC) domain-containing proteinO.I.H.G.S.X.
0.2622.70.97Zm.7644.2.S1_atBM341428--4e+0At5g23760heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.2115.50.97Zm.17862.1.A1_atCO520595serine/threonine-protein kinase WNK4-5e+0At4g09440unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.798.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM320463protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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