Co-expression analysis

Gene ID Zm.11999.1.A1_at
Gene name hypothetical protein LOC100191418
Homology with ArabidopsisSimilar to At1g62421: unknown protein (HF=3e-1)
Module size 11 genes
NF 0.26
%ile 21.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6481.70.93Zm.11999.1.A1_atCK827525hypothetical protein LOC100191418-3e-1At1g62421unknown proteinO.I.H.G.S.X.
0.4352.80.97Zm.8563.1.A1_atBM336306hypothetical protein LOC100193983-9e-15At1g23110unknown proteinO.I.H.G.S.X.
0.4048.50.96Zm.9319.1.A1_atCF627080hypothetical protein LOC100216855-2e+0At5g10000ATFD4 (ferredoxin 4)O.I.H.G.S.X.
0.4048.50.96Zm.8565.1.S1_atCO528893hypothetical protein LOC100279882-8e-7At2g01110APG2 (ALBINO AND PALE GREEN 2)O.I.H.G.S.X.
0.3844.20.97Zm.15436.1.S1_atCD437346--2e+0At5g37750heat shock protein binding / unfolded protein bindingO.I.H.G.S.X.
0.3336.00.95ZmAffx.1084.1.S1_atAI987532--4e+0At1g31760SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.2724.60.96Zm.15903.1.S1_atL77912.1phenylalanine ammonia-lyase-2e-14At3g10340PAL4 (Phenylalanine ammonia-lyase 4)O.I.H.G.S.X.
0.2014.20.95Zm.8233.1.S1_a_atAY103797.1--6e-14At2g24590splicing factor, putativeO.I.H.G.S.X.
0.1912.80.95Zm.4250.1.A1_atT18710autophagy-related 3-8e-13At5g61500ATG3O.I.H.G.S.X.
0.1811.60.95Zm.14591.3.S1_a_atCK370424triosephosphate isomerase, cytosolic-3e-7At3g55440TPI (TRIOSEPHOSPHATE ISOMERASE)O.I.H.G.S.X.
0.125.90.95ZmAffx.1069.1.S1_atAI941949--6e+0At5g12380annexin, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.398.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.698.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.298.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM162264Mutant 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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